LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele33g0190	ATGGATTTGTCGATTATGCACGACAATGACCGGTATGAGCTCGTGCGTGATATTGGGTCTGGAAATTTTGGAGTCGCCAGGCTTATGAGGGACAAGCAAACGGACGAACTTGTTGCTGTTAAGTACATAGAGAGGGGTGATAAGATAGATGAAAATGTGCGAAGGGAAATCATAAATCACAGATCACTTAGGCATCCCAATATTGTCAGGTTCAAGGAGGTCATATTGACACCAACACATCTGGCTATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTCGAACGAATATGCAATGCCGGGCGGTTCAGTGAGGATGAGGCTCGTTTCTTTTTCCAACAACTTATATCTGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCACCGGGACTTGAAGTTGGAGAACACTCTATTGGATGGTAGCCCAGCTCCTCGTTTGAAAATATGTGATTTTGGGTACTCCAAGTCCTCTGTGCTACATTCACAACCAAAATCTACAGTTGGTACTCCAGCTTATATTGCTCCAGAAGTTTTGCTTAAGAAGGAGTATGATGGCAAGATTGCCGATGTATGGTCTTGTGGGGTGACTTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAACCAAAAAATTTCCGCAAGACAATACATAGGATTTTGAATGTTCAATACTCAATTCCCGACTATGTTCATATTTCTCCTGAATGCCAACATCTCATCTCAAGGATCTTTGTTGCCGACCCTGCAAAGAGGATAACAATCCCTGAGATCAGAAACTATGAATGGTTTCTGAAGAACCTACCAGCTGATCTTATGGATGATCATAGTACAGCGAACAACAAGTTTGAGGAGCCTGATCAACCAATGCAGAACATAGAGGAAATCATGCAAATAATTTCTGAAGCTACAATTCCTGCAGCTGGCACTCAGTCTCTCAACAATTATCTTACCGGAAGCTTAGATATTGATGATGACATGGAGGAGGACCTCGAGTCTGATGCTGATCTCGACATCGATAGTAGCGGAGAAATAGTTTATGCAATGTAA	1062	0.4266	MDLSIMHDNDRYELVRDIGSGNFGVARLMRDKQTDELVAVKYIERGDKIDENVRREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECQHLISRIFVADPAKRITIPEIRNYEWFLKNLPADLMDDHSTANNKFEEPDQPMQNIEEIMQIISEATIPAAGTQSLNNYLTGSLDIDDDMEEDLESDADLDIDSSGEIVYAM	353

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele33g0190	353	SMART	serkin_6	12	268	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g0190	353	Pfam	Protein kinase domain	12	268	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g0190	353	FunFam	Serine/threonine-protein kinase SRK2E	5	87	-	-
	Lele33g0190	353	Gene3D	Phosphorylase Kinase; domain 1	1	87	-	-
	Lele33g0190	353	ProSiteProfiles	Protein kinase domain profile.	12	268	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g0190	353	CDD	STKc_SnRK2-3	11	267	-	-
	Lele33g0190	353	ProSitePatterns	Protein kinases ATP-binding region signature.	18	41	IPR017441	GO:0005524
	Lele33g0190	353	SUPERFAMILY	Protein kinase-like (PK-like)	6	300	IPR011009	-
	Lele33g0190	353	PANTHER	SERINE/THREONINE KINASE	11	299	-	-
	Lele33g0190	353	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	127	139	IPR008271	GO:0004672\|GO:0006468
	Lele33g0190	353	FunFam	Serine/threonine-protein kinase SRK2E	88	276	-	-
	Lele33g0190	353	Gene3D	Transferase(Phosphotransferase) domain 1	88	276	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele33g0190	Lele-ChrLele33	1208932	1211683	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele33g0190	11	293	CBL-interacting serine-threonine protein kinases	AT4G24400	43.345	1.23e-70	224

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_OST1L	Lele33g0190		Pkinase	3.8e-71	CL0016