Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0179 ATGGGTTGCCGGAGAAAGAACGCCGGAGAATCACCTGAAGAGACCGACTCTGAAAACGAATCACCTAAGAGGATGAGAAATGAAGAAGGCTTTTCGCTTTATGAACAGATTAGGGACCAACGGATCAAGGAAAACCAAGAGAGGCTGCACAAAGACTCATATTGCATATGTGGACCAATAAAGTATTATGAAGGCCGCGAGAAGCGTGACTCCTCCAAAAATTTTGAGATTTGCATACCGGAAGGTACAAATCCAGAAGTTTACACTGAAGAGCATCAAAAGCTTCTAGGGGATTGTAAAATGGATTGGCAATTGTACGTTGATGGATATGATGATGATGGGAATCGTTTATATGAACCGATCAAAGGGCAGACGTGTGTCATCAATGCAGGAAATCATTTGCTTCCTTGCAGGCACAAAGCTCTTTGTTTGCATACCTATGGTGGCAAATGCGAGTTACTCCAAGGACAGCTTTGTGGAGAATGCTTGTGTATGAGATATGGAGAAAACGTTTTAGAAGCAAACGAGAATGGCAAATGGATATGGCCATCTTGCTGGGGAATTTGCAATTATAGTCGTTGCCGTAGAGCAAAGGGTTGGATGGCCGCTGGTAATCTGTACAGTAAGGTGTCAGAATTAGGATTCAAATCTGTGGCACATTATCTCATCCAAACTTATCGCTCTAAAGATCACAAGCCCCTGCAGCAGAGGAGACTAATTCGCACGAAGGGGGGCCCTGGTGCGATCATTGTTGAGGACTTGGGAAGTTCAATGATTGCATTTGCTTCAAATGATCATGGTACCGGGTCAATGGTGGTGGTATTAATGAAATGCCTACATGGGAGTCGTCTTTTGGAGATATCAAGAGATGATTTGGAAAGTGGAAACTGGAGATTTGGATGTGACATTTTTGTTGGGAGACAACCAGGAAAAACGAACTGTAATTACGCGCTCTCCATCAACAACAAGGGCGAAAGACGCAGGAAGTTGAGCTCTGTTCATCCTCCTGGGTTTGGAAATTCTGCTCTCTGCAAACCCCAAAGTCTCCTTCTTTCGAAAGGAGAAAAAGGGATTTCAAATGCTGTGAACCTTCTTGTTTCCGGCTTTCCTAGCACTCGGAGAATGCCGCGACCTTGCTTTCACAAGCTTATTTGTCCCTCCACGCTCCAATCCCGGCAGCTGACTATTCCAGATACTTTTCTGAGAAAATTTGGGGGTGATCTTTCTACAGTTGCTACCCTCACTGTCCCCGATGGCAGTGTTTGGCAAGTAGGATTGAAAAAGTTGGGCAACAAATCTTGGCTCCTTGATGGCTGGCAGGAATTTATTCAACGCTACTCCATTGGTGTTGGTTACTTGCTGATATTCAGATATGAAGGCAAATCATCATTCAATGTTCATATTTTCAATTTGGCTACTTGTGGGATAAATTACCAATCAAACACACGAAGTAATGAAGGGACTTTCTTTCCAAATCAACATCTTAATTTTTATGATCTTGAAGATGAAGAAGACTCCATTGAATTCTTAGATTCATCACCTTCATCCCTTACTCCTGGTGCGTTGCAGAACAAGGCTTTTCCTGGAACTCCAGCATTGCAGAATTTGTTCCATGGGTCTAAGCTTAACTCCATAAACTGGGGAGATGGGGGGCATTCCCTTTCTCCCAAGGTTGCCAATTCTCAAGACAATCAATCAAGCAGAAATATAGGTGTTCAGTTTAATGCAGTTGAGTTTAAAAAGTCTACTGAAGAGCTAAGATTGCGTTTTTCTAATGGGGAAATGCAAAGAGTTAAGAAAACTATAAGAAAGAAGCGGAAAATGGATTCTAATGGACAAGAACCCTCTGCTCAACATGAAGAAGAGGGGGAAATGCGCTATAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACTGTGACAGCTGAAGAAAGAGAGAGAGCAGTCAATTCAGCAAAAGCATTTGAACCGGCTAATCCTTTCTGTCGAGTTGTCCTGCGACCTTCCTATTTATATAGGGGATGCATAATGTATTTGCCATCCTGTTTTGCCGAAAAGCATTTGAATGGGGTTTCAGGATTCATTAAACTTCAGATCTCTTATGATGGAAAACAGTGGCCTGTTCGCTGCCTTTACAGAGGAGGGAGAGCAAAGTTAAGCCAAGGGTGGTTTGAATTTTCACTGGAAAATAATTTAGGCGAAGGGGATGTCTGTGTTTTTGAACTTCTTAGAATGAAGGAGGTAGTGTTGAAAGTTACTATATTTCGTGTCACTGAGGATGCAGGATTGATGAGTCCTCCTATGCATCATCAACACCAAAACGTCAGCCCAAGTAAACTGTTGAATACTCCTATGCCACTAGCCATCATGACCCCGAAACTGATTAGAAACTAG 2394 0.4256 MGCRRKNAGESPEETDSENESPKRMRNEEGFSLYEQIRDQRIKENQERLHKDSYCICGPIKYYEGREKRDSSKNFEICIPEGTNPEVYTEEHQKLLGDCKMDWQLYVDGYDDDGNRLYEPIKGQTCVINAGNHLLPCRHKALCLHTYGGKCELLQGQLCGECLCMRYGENVLEANENGKWIWPSCWGICNYSRCRRAKGWMAAGNLYSKVSELGFKSVAHYLIQTYRSKDHKPLQQRRLIRTKGGPGAIIVEDLGSSMIAFASNDHGTGSMVVVLMKCLHGSRLLEISRDDLESGNWRFGCDIFVGRQPGKTNCNYALSINNKGERRRKLSSVHPPGFGNSALCKPQSLLLSKGEKGISNAVNLLVSGFPSTRRMPRPCFHKLICPSTLQSRQLTIPDTFLRKFGGDLSTVATLTVPDGSVWQVGLKKLGNKSWLLDGWQEFIQRYSIGVGYLLIFRYEGKSSFNVHIFNLATCGINYQSNTRSNEGTFFPNQHLNFYDLEDEEDSIEFLDSSPSSLTPGALQNKAFPGTPALQNLFHGSKLNSINWGDGGHSLSPKVANSQDNQSSRNIGVQFNAVEFKKSTEELRLRFSNGEMQRVKKTIRKKRKMDSNGQEPSAQHEEEGEMRYRFYESASARKRTVTAEERERAVNSAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISYDGKQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVVLKVTIFRVTEDAGLMSPPMHHQHQNVSPSKLLNTPMPLAIMTPKLIRN 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0179 797 SMART B3_2 662 758 IPR003340 GO:0003677
Lele33g0179 797 SMART B3_2 380 472 IPR003340 GO:0003677
Lele33g0179 797 Gene3D - 372 474 IPR015300 -
Lele33g0179 797 SUPERFAMILY DNA-binding pseudobarrel domain 376 474 IPR015300 -
Lele33g0179 797 CDD B3_DNA 660 756 IPR003340 GO:0003677
Lele33g0179 797 ProSiteProfiles B3 DNA-binding domain profile. 662 758 IPR003340 GO:0003677
Lele33g0179 797 Pfam B3 DNA binding domain 665 757 IPR003340 GO:0003677
Lele33g0179 797 Pfam B3 DNA binding domain 381 469 IPR003340 GO:0003677
Lele33g0179 797 MobiDBLite consensus disorder prediction 602 623 - -
Lele33g0179 797 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 136 222 IPR018866 -
Lele33g0179 797 SUPERFAMILY DNA-binding pseudobarrel domain 655 757 IPR015300 -
Lele33g0179 797 PANTHER OS05G0300700 PROTEIN 23 618 IPR040221 GO:0006355
Lele33g0179 797 ProSiteProfiles B3 DNA-binding domain profile. 379 472 IPR003340 GO:0003677
Lele33g0179 797 Gene3D - 639 760 IPR015300 -
Lele33g0179 797 MobiDBLite consensus disorder prediction 607 623 - -
Lele33g0179 797 MobiDBLite consensus disorder prediction 1 31 - -
Lele33g0179 797 CDD B3_DNA 378 470 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0179 Lele-ChrLele33 1120344 1130683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0179 375 762 B3 DNA Binding Superfamily AT3G18990 51.263 1.79e-123 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele33g0179 B3 2e-14 CL0405