Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0178 ATGCCATTTTATTCCAGCCACGCAGCACGGTTTGTAGCACAGATATGGGTTGGTGATGAGTTCCTCGCCTTCTTCCATTACCATATATACGATCGTCTCTCTCTTCTTTTCTGTTTCTCTTCAACCTTCATCAGCCATTATGTCATTTCTGCAGCTCAAGCCTCACTTCTCAAATACCATTCCATAAAGGCACAAGAAGAAGATGCGATCGACCTATCTTCGAAGGGCTCCGACCTACACTCAGCAACATTAATGGTGACGTGTATATATTTTGGTAATGGTTGGGAGAAGTTCACGAAGGACAATTCATTAGAGGCTGGGTACTTTGTTATCTTTTCATTTGATGGAACTAACACATTCAACTTCAAAATCTACAACCCAAATCGTTGTGAAATGATCGAGCAGCCCAAAGAGGAGGAAGAAGATAAAGAAAATAATTCTGCAGAGGAAGTAAAGGAGGAAGATGATGATGATGGTGAAGAGAAGGATGAACAAGTCAACGAAAGAAGTAGGAAGGGAAAAAGCATGAGTCATAGCTTCAGCCAAACGTATCCCACATGCTTTTGTGCGCAACTTGAATGGCAGAGTGCCAAGAGAAAGCCATCCTTGAGAGTGGAGGAGGCAGATTGTGGCATGTTGAAATCTGTAACATTGATGGTCACACGTGTTTCTGTAATGATGAAAATTGATGAAAATAGCCGCTGCAGATACAAGAATGCCAAGAGGAGCGAGTCCAAGATAGAAACTTCCACAAAAGCTACCGAAATAAATCTTTCTTAG 780 0.4179 MPFYSSHAARFVAQIWVGDEFLAFFHYHIYDRLSLLFCFSSTFISHYVISAAQASLLKYHSIKAQEEDAIDLSSKGSDLHSATLMVTCIYFGNGWEKFTKDNSLEAGYFVIFSFDGTNTFNFKIYNPNRCEMIEQPKEEEEDKENNSAEEVKEEDDDDGEEKDEQVNERSRKGKSMSHSFSQTYPTCFCAQLEWQSAKRKPSLRVEEADCGMLKSVTLMVTRVSVMMKIDENSRCRYKNAKRSESKIETSTKATEINLS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0178 259 SUPERFAMILY DNA-binding pseudobarrel domain 88 132 IPR015300 -
Lele33g0178 259 Coils Coil 137 157 - -
Lele33g0178 259 PANTHER B3 DOMAIN-CONTAINING 88 204 - -
Lele33g0178 259 MobiDBLite consensus disorder prediction 136 180 - -
Lele33g0178 259 MobiDBLite consensus disorder prediction 143 163 - -
Lele33g0178 259 SMART B3_2 39 128 IPR003340 GO:0003677
Lele33g0178 259 CDD B3_DNA 90 126 IPR003340 GO:0003677
Lele33g0178 259 ProSiteProfiles B3 DNA-binding domain profile. 90 128 IPR003340 GO:0003677
Lele33g0178 259 Gene3D - 24 130 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0178 Lele-ChrLele33 1115152 1118530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0178 88 131 B3 DNA Binding Superfamily AT5G66980 40.909 4.79e-07 48.1