Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0169 ATGGAGGGTTTCTCCCTGCAATCACTGACCCTGACATCCATTCCTTCTTCTTTATCACAAGGATCGCTTTTGGAGAAACCTTCCGGTTATGTCAAGCTTTTCAAACACTCCGATTTGACCAAGTACCCATGTACCACAAATGACTCCAAGCTCAAAGTTCGTAGCATTCGAGCTCAAGCTTCGGGTTCAACAACATTCAGTCCAAATACCGCAGAGGCCGTTCCTGGGAAAACAGATTCCAAGGATGACAACGTAGTATTTGTTGCCGGGGCTACTGGTAGAGTTGGTTTACGAACTGTGAGGGAGCTAATAAAGCTTGGCTTCCGAGTGAGAGCTGGAGTGAGAAATGCTCAGAGAGCGGAATCACTAGTGCAGAGTGTTAAACAGTTGAGACTTGATGCTGCAAATGCAAGTGAAGGGAGTCAACCTGTAGAAATGATTGAACTAGTAGAATGTGATTTGGAGAGAAGAGATGGGATTGCATCGGCATTAGGGAATGCATCGACCGTAATATGCTGCATTGGTGCCAGTGAGAAGGAAGTTTTTGACATCACTGGACCCTATCGTATAGATTATCTAGCTACCAAAAACCTAGTCGATGCCGCAACTGTTGCCAAAGTAAATCACTTCATATTAGTTTCTTCTTTGGGAACAAACAAATTTGGCTTTCCTGCGTCTATTCTCAATTTGTTTTGGGGAGTTCTATTTTGGAAAAGGAAGGCAGAAGAGGCATTAATAGCCAGTGGACTTCCATACACAATAGTGAGACCTGGAGGCATGGAACGGCCTACCGATGCTTTCAAGGAAACTCATAATATAACCCTTTCAACAGAAGATACTTTATTTGGTGGTCTGGTGTCAAATCTTCAGATTGCGGAACTCATGGCAGTAATGGCCAAGAATCGTGATCTTTCGTATTGCAAAATAGTGGAGGCAATTGCTGAGACCACTGCACCACTGACCCCCATGGAGGAACTTCTTGCAAAGATACCTTCTCAACGTGCTTACAATTACCCAGCCAAGACACCAGATGTTGCAGCCGTCAGTGATCCAGCACCCTCTGCTAGTGTTGTGGTAGTGGAACCCAGCATTACTACTGAGAAAGAGACTGCTCAACCAAAACCTGTGACTAAACAGCCACTTTCTCCTTATACTGCTTATGAGGATTTAAAACCACCATCATCCCCTTCTCCACTGAAGCCTGATGCAGTGCCTAAACCTAAACCCAGTGCTTCTGATACTCCAAGTAGCGTTCAAGAAAAGGATGGCATTTCTCAGGCATCTGCCATAGCAGAACCGGTAGCAGAGTCTCGCTCTCCATATGCCGCCTATGAGGATTTGAAGCCTCCCACTTCGCCAAGCCCAACACCAAGCACTTCCAGTGATAAACCTCTTGCTGCGTCAACGATGGATTCTGCACCCCAACCTCCAGTACCTGAAATAACTACATCTACCACTTTCACCGAACCTGGTCCTTCTCAGGATTCAGAATCTTCTTATTCTCCCTACCCTGCATACCCTGACTTGAAGCCTCCTTCTTCATCATCCCGGAGGGCACCTGGTGGATCAAGCTCATTGGTGCCTGAGATTGATTCAGGTAATGGCCCAGCAGCTCAGCTACCAGTAGCAGATAAACCAAGTGATGAACAAAATCTTAATGAACCAAAGCCAAGACCACTTTCTCCTTATACCATGTATGAAGAGATGAAGCCTCCTGCGACACCATCGCCTTCCCCGAAGAATCATATGGTTATGGAGGACAATCAGAGCAGCGACGAAGATTACCAACACTCCGATCAGGGGTCCGTGGACGACCTTGAAAATGCGGAGGACCCCGATTCTAAGTTGGTCACCGGCACTTCCAAGGGTTCCACGATTATGGTGATTAGAAAGGAAACACTTGTAACCGCACAGGAAGAGGATTTAAGCAGAATAATGTCATTGCTATCAGTGAAAGAAAAGCATCAGGCACGTATGCTTCTTATTTTTCATAGGTGGGATATGGAGAATTTATCTGCGAAGTTTGTGGAAAAGGGGAAACCATTACTCTATGCTGAAGCTGGTGTTAGTGAAGAAGAACACCGTGATTCAGCTTCATCAGGTGCTTCTTCAATGATGTGTGGAAACTGCCATGAGAATGTTCCCTGTGATCAAGCAACAAGAATGGACTGTGGCCACTGTTTTTGCAACGACTGTTGGAGAGAACATTTCATTGTCAAGATAAATGAAGGTCAAAGTAAACACATAAGATGCATGGAACACAAATGCAATTATTATTGCAATGAGGATGTTGTAAGGAAACTAGTGAGCGAAGAGAGCAGCGAGATAGCAGAGAAATTCGAACGTTTTCTTCTTGAATCCTACATTGAAGACAATAAAAGAGCAAAGTGGTGCCCCAGCACTCCTCACTGTGGGAATGCAATCTATGTTGAGGATGATGATGATACATTATGTGAGGTGGAATGTTCATGCGGTTTGCAATTCTGTTTTAGTTGTCTGTCAGAACCACATTCCCCTTGTTCATGTTTGATGAGGGAACTTTGGGTTGAAAAGTGTGTTGGTGAATATGATGCCGCTTGGATAAAAAATGACACAAGACCTTGTCCAAAATGCAACATATCAGGGAAAATGATCGGTGGTTGTAACACGGTTACATGTATTTTTGGCCAAACATTTTGTTGGCTGGGTGCCAGAGCCAAAACAGCTATGGAGGCCAAGCGTGAAGAAAGCCATCATGGGCACTATTATGATCGTTATAAAGCTCATATGGAGTCCTTAGATAAAGAAAGGAAATTGAGAGAATCTATAGTAAAGAAGGGGATGGACTATTCTATTTCTACCCACGGAGACTATCGCTGGCTAAATGATGGAGTCTCCACACTTGTGAGGTCTAGGCGAGTCCTATCATATTCATATCCGTTTGAACTCTATATGTTTGAAGAGGAGCCATTTAAACATGAAATCTCGGACGAGGAAAGGGAAATAAAATACAGCTTATTCAAGGATCATCAGGAGCAGCTTGAGGCAAAAGTTGAGAAGCTCTCTGAAATTTTGAAAATGTCCTTTGAAAGCAGTAACGAGGTTTCGGATGATATAAGGATGCAGGTTATCAATTTGTCAGCAGTTATTAACAAGTTTTGTGAGGGAATGTATGAGTTCATCCAGAATGACTTGTTGGGTTCTCTCTCACATGGCACTCATCACAGGATAGCTCCATACAAGTTATCGAAGCAACAGTGA 3240 0.4398 MEGFSLQSLTLTSIPSSLSQGSLLEKPSGYVKLFKHSDLTKYPCTTNDSKLKVRSIRAQASGSTTFSPNTAEAVPGKTDSKDDNVVFVAGATGRVGLRTVRELIKLGFRVRAGVRNAQRAESLVQSVKQLRLDAANASEGSQPVEMIELVECDLERRDGIASALGNASTVICCIGASEKEVFDITGPYRIDYLATKNLVDAATVAKVNHFILVSSLGTNKFGFPASILNLFWGVLFWKRKAEEALIASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELMAVMAKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRAYNYPAKTPDVAAVSDPAPSASVVVVEPSITTEKETAQPKPVTKQPLSPYTAYEDLKPPSSPSPLKPDAVPKPKPSASDTPSSVQEKDGISQASAIAEPVAESRSPYAAYEDLKPPTSPSPTPSTSSDKPLAASTMDSAPQPPVPEITTSTTFTEPGPSQDSESSYSPYPAYPDLKPPSSSSRRAPGGSSSLVPEIDSGNGPAAQLPVADKPSDEQNLNEPKPRPLSPYTMYEEMKPPATPSPSPKNHMVMEDNQSSDEDYQHSDQGSVDDLENAEDPDSKLVTGTSKGSTIMVIRKETLVTAQEEDLSRIMSLLSVKEKHQARMLLIFHRWDMENLSAKFVEKGKPLLYAEAGVSEEEHRDSASSGASSMMCGNCHENVPCDQATRMDCGHCFCNDCWREHFIVKINEGQSKHIRCMEHKCNYYCNEDVVRKLVSEESSEIAEKFERFLLESYIEDNKRAKWCPSTPHCGNAIYVEDDDDTLCEVECSCGLQFCFSCLSEPHSPCSCLMRELWVEKCVGEYDAAWIKNDTRPCPKCNISGKMIGGCNTVTCIFGQTFCWLGARAKTAMEAKREESHHGHYYDRYKAHMESLDKERKLRESIVKKGMDYSISTHGDYRWLNDGVSTLVRSRRVLSYSYPFELYMFEEEPFKHEISDEEREIKYSLFKDHQEQLEAKVEKLSEILKMSFESSNEVSDDIRMQVINLSAVINKFCEGMYEFIQNDLLGSLSHGTHHRIAPYKLSKQQ 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0169 1079 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 83 302 IPR036291 -
Lele33g0169 1079 MobiDBLite consensus disorder prediction 410 424 - -
Lele33g0169 1079 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 581 IPR044719 -
Lele33g0169 1079 MobiDBLite consensus disorder prediction 475 501 - -
Lele33g0169 1079 FunFam RBR-type E3 ubiquitin transferase 701 792 - -
Lele33g0169 1079 MobiDBLite consensus disorder prediction 586 612 - -
Lele33g0169 1079 Pfam Ariadne domain 898 1074 IPR045840 -
Lele33g0169 1079 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 701 792 IPR013083 -
Lele33g0169 1079 SMART ibrneu5 778 842 IPR002867 -
Lele33g0169 1079 CDD SDR_a5 86 301 - -
Lele33g0169 1079 Pfam NAD(P)H-binding 90 301 IPR016040 -
Lele33g0169 1079 ProSiteProfiles TRIAD supradomain profile. 703 926 IPR044066 -
Lele33g0169 1079 SUPERFAMILY RING/U-box 857 896 - -
Lele33g0169 1079 FunFam Protein TIC 62, chloroplastic 82 333 - -
Lele33g0169 1079 MobiDBLite consensus disorder prediction 516 530 - -
Lele33g0169 1079 Pfam IBR domain, a half RING-finger domain 778 842 IPR002867 -
Lele33g0169 1079 Gene3D - 82 333 - -
Lele33g0169 1079 SUPERFAMILY RING/U-box 704 790 - -
Lele33g0169 1079 MobiDBLite consensus disorder prediction 366 619 - -
Lele33g0169 1079 Gene3D - 838 897 - -
Lele33g0169 1079 Gene3D - 898 1059 - -
Lele33g0169 1079 SUPERFAMILY RING/U-box 778 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0169 Lele-ChrLele33 1061818 1069267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0169 646 1074 ARIADNE family AT2G16090 54.624 3.55e-153 463