Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0152 ATGGCTTCCAGTTCCGATTCCCCGCCTCCGCCTGATTCATCTTCGTCGGATTCTCCTCCGTCACCGCCACCACCGGATTCAAGTTCATCTGACGATTCTCCGTCCCCACCACAATCCCCTCCTCCATCATCCCCTCCGCCGCAATCTCCTCCACCATCATCGCCGCCACCACCCGACGACCATTCACCCCCACCGCCATCCGACCATGACAATGGTGGAGACAACAATAATGACTCATCTCCTCCCCCTCCTCCACCATCTAATGGCAACGATGGCGACGGCGGAAATAATAACAAGAGACCTCCACCTCCACCACCACCACCGAATTCCAAGGGAGATCAGTTTTCGCCTCCGCCGCCAGTGCGCCGGTTGTCTCCACCGGGAAAAAGTTCACACGAATCATCATCGAATAATCCATCACCGTCAACAGGTAGCAATAACGATGGATCTCAATTGAGCCTACCAGCTATTATTGGTTTGGCTGCTGGAGCTGGCTTGTTGCTTCTTGTGTTCATCCTCTTCGTTGTATGCAACAGAAGAAAGAAGAAGAGATCTGAGGGTCCCATTATTTACTACACCAACAAAAAATACGATGATGACTATTACAAGCACGCGAAGAAGGGAAACAATTGGAACAACACTGGATATAACGCGGGTGATCAACACGTTATGAATATGCCAACACCTCCAGGAGCAGTAGGGAACAAGGCTCCTTGGGGAGCACCGCCGGCTCCATTCTCTGGAAATATGAACAGCGGTGAGATGAGCAGCGCGAGCTATTCAGGGCCGGTGGGTCCGATGCAGCCGCCTCCACACCCATCGGTGGCGCTAGGGTTCAACAAGAGCACATTCACGTACGAGGAGCTAGCGGCTGCAACAAATGGGTTCGCCCAAGGGAATCTACTGGGACAAGGTGGGTTCGGGTATGTGCACAAAGGAGTGCTGCCCAACGGGAAGGAAATAGCGGTGAAGAGTCTCAAGTCCACCGGAAACCAAGGTGACAAAGAGTTTCAGGTTGAGGTTGATATCATTAGCCGAGTTCATCATCGCCATCTCGTTTCTCTTGTTGGCTATTGCATTCAAGAGGGCCGTAGTCTCTTGGTCTATGAGTTCGTGCCTAACAAAACTATGGAATACCATCTTCACGGAAAGGACCGACCTGTTATGGATTGGCCTACTAGGCTCAAAATTGCAATTGGATCGGCCAAGGGACTTGCCTACTTGCACGAGGACTGCCACCCTCGAATCATCCACCGTGACATAAAGGGCGCAAATATTCTACTCGAAAACAACTTCGAAGCCAAGGTGGCAGATTTTGGATTGGCAAAGTTTACGCAAGACAACAACACCCATGTTTCCACCCGTGTAATGGGAACATTCGGGTATCTGGCTCCTGAGTATGCTTCAAGTGGCAAATTAACAGAGAAGTCTGATGTGTTCTCATTCGGTATTATGCTTCTGGAGCTCATAACAGGACGACCTCCCGTTGACACTGCCGGGGAATATGAAGAGGACAGTTTAGTTGACTGGGCTAGACCTCTTTGCATAAAAGCGATGGAAAGTGGAAGCTTTGAAGGTCTGATGGATTCACGACTTGGCAACAATTATGATATGCAGGAGATGGCCCGTATGGTGGCTTGTGCTGCTGCCAGCGTCAGACACTCCGCAAGAAGGCGACCAAAAATGAGCCAAATAGTACGTGCACTGGAGGGTGACGTGTCACTAGATGATCTGAGCGAGGGGGTGAAGCCAGGGCAGAGTACAATGTTCACAACCAACGGCACGGAGTACGATGCAAGCACTTACAGTGCGGACATGAAGAAGTTCAGGAAGCTTGCATTGGATAGCGGCTATGCCAGCAGTGAGTTTGGCCACACTAGCGAGTATGGTCTCAACCCTTCCTCCTCTAGCAGCGAGGCGGGTCACTCTTCTGAATACACCCCCAAGAACACCAAGTAA 1959 0.511 MASSSDSPPPPDSSSSDSPPSPPPPDSSSSDDSPSPPQSPPPSSPPPQSPPPSSPPPPDDHSPPPPSDHDNGGDNNNDSSPPPPPPSNGNDGDGGNNNKRPPPPPPPPNSKGDQFSPPPPVRRLSPPGKSSHESSSNNPSPSTGSNNDGSQLSLPAIIGLAAGAGLLLLVFILFVVCNRRKKKRSEGPIIYYTNKKYDDDYYKHAKKGNNWNNTGYNAGDQHVMNMPTPPGAVGNKAPWGAPPAPFSGNMNSGEMSSASYSGPVGPMQPPPHPSVALGFNKSTFTYEELAAATNGFAQGNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGNQGDKEFQVEVDIISRVHHRHLVSLVGYCIQEGRSLLVYEFVPNKTMEYHLHGKDRPVMDWPTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKFTQDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGIMLLELITGRPPVDTAGEYEEDSLVDWARPLCIKAMESGSFEGLMDSRLGNNYDMQEMARMVACAAASVRHSARRRPKMSQIVRALEGDVSLDDLSEGVKPGQSTMFTTNGTEYDASTYSADMKKFRKLALDSGYASSEFGHTSEYGLNPSSSSSEAGHSSEYTPKNTK 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0152 652 SMART serkin_6 296 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0152 652 MobiDBLite consensus disorder prediction 1 148 - -
Lele33g0152 652 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Lele33g0152 652 Gene3D Phosphorylase Kinase; domain 1 273 371 - -
Lele33g0152 652 MobiDBLite consensus disorder prediction 128 148 - -
Lele33g0152 652 Pfam Protein tyrosine and serine/threonine kinase 299 568 IPR001245 GO:0004672|GO:0006468
Lele33g0152 652 MobiDBLite consensus disorder prediction 624 652 - -
Lele33g0152 652 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 165 618 - -
Lele33g0152 652 MobiDBLite consensus disorder prediction 98 125 - -
Lele33g0152 652 FunFam Proline-rich receptor-like protein kinase PERK8 270 371 - -
Lele33g0152 652 SUPERFAMILY Protein kinase-like (PK-like) 275 569 IPR011009 -
Lele33g0152 652 MobiDBLite consensus disorder prediction 12 62 - -
Lele33g0152 652 ProSiteProfiles Protein kinase domain profile. 296 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0152 652 Gene3D Transferase(Phosphotransferase) domain 1 372 580 - -
Lele33g0152 652 FunFam Proline-rich receptor-like protein kinase PERK1 372 580 - -
Lele33g0152 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0152 Lele-ChrLele33 957073 960560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0152 139 652 Trihelix Transcription Factor Family AT1G70460 48.356 3.16e-151 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele33g0152 PK_Tyr_Ser-Thr 1.6e-45 CL0016