LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele33g0147	ATGGCCTCCGACGACTCTCCTGGTCACAGCCTTACTCGGCTCTCTAACAAAACTCCATTTCTTGGTTTAAAGCTCTTCTTCGTGGTTGCCATTTCCCTTCTGATCGTGCTGGTAATTTTGCTTCTGATATTTCTCTGCACTCGCCGGAATCGAATCTCAACAAATCGTAAAATGCGCGTGAAGCACAGTTCTGGGACGATTCCCTTGGTCTCCAAGGAGACTGTGGAAGTCAAAGCCTTGGATCTCGAGCAGAATTGTGAGCAAGCAGGGATTAAAATCGCGGTCGAGGATCCGAAGAAGGAGAAGGTTGAGATTGAGGTTGAGCGAAGAGGGAAGGATACGAGCGGCGAGATTGACATGTCGGTGGACGCGCCGAACATTGGATGGGGGCGATGGTATAGCTTGAGGGAGCTGGAGGATGCGACACGTGGATTTACTGAAGAAAGTGTGATTGGTGAAGGAGGGTATGGTATTGTATACAAAGGAGTTCTAGGAGATGGGTCGGTGGTGGCTGTGAAGAATCTTCTGAACAACAAGGGTCAAGCAGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTAAGGCATAGGAATTTGGTGGGTTTAGTTGGATATTGTGCAGAAGGTCCTCAAAGGATGCTAGTTTATGAGTATGTTGATAATGGAAATTTGGAGCAGTGGTTGCATGGTAATGTTGGGCCTGTTAGTCCCTTGACATGGGATATACGGATGAAAATTGCCATTGGGACAGCAAAAGGGCTGGCGTATCTGCATGAAGGGTTAGAACCCAAAGTGGTACACCGAGACATAAAATCCAGTAACATTCTTTTGGACAGAAAGTGGAATGCTAAAGTATCAGACTTTGGACTAGCCAAGTTATTAGGCTCTGAGAAGACCTATGTGACCACACGTGTAATGGGAACATTTGGATATGTTTCTCCTGAGTATGCAAGCACGGGAATGCTTAATGAGGGAAGTGATGTGTATAGCTTCGGAGTTCTACTCATGGAGATAATTACAGGAAGAAGTCCCATTGACTATTCTAGACCACCTGGAGAGATGAATTTGATTGATTGGTTCAAGGGAATGGTAGCTAGTCATCATGGTGAAGAGCTGGTAGATCCTTTGATCAAGGTTCAGCCCCCTCCGAGATCTTTGAAACGAGCTTTGCTGGTTTGCCTGCGCTGTGTAGATTTGGATGTTAGTAAACGACCAAAGATTGGTCAAATCATTCATATGCTTGAGGCAGATGATTTCCCCTTTCGTTCTGAACTTCGTACAATAAGAGACAGAGCCCGTTCCTCGTGCCACCAAGTTGTTCCCTCTTCTTCCCCATTGTGCATACATCTTCCTGTCAGTTCTTGGCACCATTATGCTGTATTACCTTGCTTTGTGAAGAGATCAGCCTTCTTGTAA	1422	0.4578	MASDDSPGHSLTRLSNKTPFLGLKLFFVVAISLLIVLVILLLIFLCTRRNRISTNRKMRVKHSSGTIPLVSKETVEVKALDLEQNCEQAGIKIAVEDPKKEKVEIEVERRGKDTSGEIDMSVDAPNIGWGRWYSLRELEDATRGFTEESVIGEGGYGIVYKGVLGDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHRNLVGLVGYCAEGPQRMLVYEYVDNGNLEQWLHGNVGPVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRKWNAKVSDFGLAKLLGSEKTYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLIDWFKGMVASHHGEELVDPLIKVQPPPRSLKRALLVCLRCVDLDVSKRPKIGQIIHMLEADDFPFRSELRTIRDRARSSCHQVVPSSSPLCIHLPVSSWHHYAVLPCFVKRSAFL	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele33g0147	473	FunFam	Putative receptor-like serine/threonine-protein kinase	221	431	-	-
	Lele33g0147	473	Gene3D	Transferase(Phosphotransferase) domain 1	221	427	-	-
	Lele33g0147	473	FunFam	Probable serine/threonine-protein kinase At1g01540	125	220	-	-
	Lele33g0147	473	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	267	279	IPR008271	GO:0004672\|GO:0006468
	Lele33g0147	473	ProSiteProfiles	Protein kinase domain profile.	145	424	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g0147	473	CDD	STKc_IRAK	151	417	-	-
	Lele33g0147	473	SMART	serkin_6	145	423	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g0147	473	Gene3D	Phosphorylase Kinase; domain 1	119	220	-	-
	Lele33g0147	473	PANTHER	OS01G0323000 PROTEIN	12	432	-	-
	Lele33g0147	473	Pfam	Protein kinase domain	145	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g0147	473	SUPERFAMILY	Protein kinase-like (PK-like)	129	434	IPR011009	-
	Lele33g0147	473	ProSitePatterns	Protein kinases ATP-binding region signature.	151	173	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele33g0147	Lele-ChrLele33	925307	928627	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele33g0147	86	417	Receptor kinase-like Gene Family	AT4G02010	45.536	1.02e-92	295

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Lele33g0147		Pkinase	1.2e-45	CL0016