Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0142 ATGCTTTCATGTCAAAAGAGCCAGCTTCACTCTCCATGCTTTCTCCCTCTCCAATTCCTCTCCACCCCAACTTCCACCATTGTCAACTGCCAAAATGCACATGGCCCCGATTCCCATAACTTCATTCTCCGCAAGCAGAATTCCAAATCCGCCGCCTTTCTCCTTCACCAACTATCTACCGACCGAGAAAACCATCATTCCCCGCAATTCAATCTCAAATCTAGTGACCTTCAACACGACATGCCCGATGAAGAAAAGGTTAAGCTTCTAGAGCTTTCCCTTGTGAGAAAAAGAACCCCTCAGTTTCCTGGCTCCATCTATGTTCAATCTCCTAGTGATCCCGATGTGGGTTCTTCTTTGCCGCCTCTGCGAACTCTGTTTAGAGAAAAAGTTGAAGGTGAAGGTGCCGACGAGGAGGAGATAATAATGCGTGCGATTGAGATTCGAAGGAAGGTGACGCGAGAGATTTTTTCGGAAGCGATGATAAAGGGCAAGTTTGGAATCACGTACGCTACCAATTTAGTCAATCGATTGACTGGTTTTATCGATTATATCATGATTGAAGCTGCTTCGATGAAAAGAATACCTCAGTATTCGCATTCGACGTTCAATTTACGCGCCAAAACGGTCATAGACGACTTACAAGTTGTGCCTCTTATCAGATGGTTGAAGCATAATGCACTGTCATATCATCGGATATCAAAACTCATTTTGATGTCAAGAGGAAACCTTGAGTCTATAAGACGTCTTGCTGAGTGGTTGAAGTCAGTACACGTGAAAGGAGAATTTCTCGGGGTTACTCTTGTTAATGCTGGAGATAATATTCTGGAACGCAGCAATGAGGAACTGGATGGGATTGTTGAGTATTTAGAGAGCAAGGGAGTCAGAAGGGATTGGATGGGTTATGTCATAAGTCGATGTCCTCAATTGTTATCTTACAGCATGGAAGAAGTTGAGACTCGCGTGAAATTCTACCAAGATATGGGTTTAAATGATCATGATTTTGGCACAATGGTTTTTGATTACCCTAAAGTTCTTGGTTTCTTTACTTTAGAAGAAATGGATCAAAAGGTTAATTACTTAAAGGAGTTTGGGCTCAAAACTCAGGATGTTGGCAGATTGCTAGCATTTAAGCCACATTTGATGGGGTGTAGCATTGAAGAAGGATGGAAGCCTCTTGCTAAGTATTTGTATTATTATGGGGTTACCCGAGATGGTATGAAGAGAATGCTTATGGTCAAACCAATGGTCTTTTGTATTGATTTGCAGACAACTATTGTGCCTAAGGTAAAGTTTTTACAGGATTTAGGGATTCGAGATGATGCAATTGGAAACATGCTTGTGAAGTTTCCTACACTGCTCACATACAGCCTCTACAAGAAGATGAGACCAGTGGTCATATTCTTGATGACTAAAGCTGGGGTCAGCGATAAAGATATTGCAAAGGTCATTGCTTTGGGACCAGAGCTCTTGGGATGCAGCATAACGCAAAAGCTTGAAGTGAATGTAAAGTATTATCTGTCACTTGGTATACGTCTTAATCAATTGGGTGAGATGATTGCGGATTTCCCAATGCTGCTCAAATACAACATAGATGTCCTTCGTCCCAAGTATAGTTATTTGCGGCGAACCATGGTCCGGCCTTTGGAAGATCTCATCGAGTTTCCAAGGTTTTTCAGTTATTCTCTCAATGGTCGAATTATCCCAAGACACAAGGTTCTGATGGAAAATCAGATTAATTTGAAGCTGCGATACATGTTGGCTTGTTCTGATGAAGAATTCAAGAAATTGGTTGATTCAAAAATTAGAAAGCGACAAACACTGCTATCTGTAGGCACAACGAGTGCTGATATTACGGACCCTCCAACATGA 1872 0.4183 MLSCQKSQLHSPCFLPLQFLSTPTSTIVNCQNAHGPDSHNFILRKQNSKSAAFLLHQLSTDRENHHSPQFNLKSSDLQHDMPDEEKVKLLELSLVRKRTPQFPGSIYVQSPSDPDVGSSLPPLRTLFREKVEGEGADEEEIIMRAIEIRRKVTREIFSEAMIKGKFGITYATNLVNRLTGFIDYIMIEAASMKRIPQYSHSTFNLRAKTVIDDLQVVPLIRWLKHNALSYHRISKLILMSRGNLESIRRLAEWLKSVHVKGEFLGVTLVNAGDNILERSNEELDGIVEYLESKGVRRDWMGYVISRCPQLLSYSMEEVETRVKFYQDMGLNDHDFGTMVFDYPKVLGFFTLEEMDQKVNYLKEFGLKTQDVGRLLAFKPHLMGCSIEEGWKPLAKYLYYYGVTRDGMKRMLMVKPMVFCIDLQTTIVPKVKFLQDLGIRDDAIGNMLVKFPTLLTYSLYKKMRPVVIFLMTKAGVSDKDIAKVIALGPELLGCSITQKLEVNVKYYLSLGIRLNQLGEMIADFPMLLKYNIDVLRPKYSYLRRTMVRPLEDLIEFPRFFSYSLNGRIIPRHKVLMENQINLKLRYMLACSDEEFKKLVDSKIRKRQTLLSVGTTSADITDPPT 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0142 623 Gene3D Transcription termination factor 3, mitochondrial 361 601 IPR038538 -
Lele33g0142 623 SMART mt_12 481 512 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 SMART mt_12 444 476 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 SMART mt_12 517 547 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 SMART mt_12 408 439 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 SMART mt_12 549 580 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 SMART mt_12 372 403 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 SMART mt_12 301 331 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 SMART mt_12 336 367 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 PANTHER CGI-12 PROTEIN-RELATED 278 374 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 Pfam mTERF 287 595 IPR003690 GO:0003690|GO:0006355
Lele33g0142 623 Pfam mTERF 246 326 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0142 Lele-ChrLele33 897747 900581 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele33g0142 mTERF 6.7e-68 No_clan