Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0140 ATGGCGTCCGCAGAAATTGAATACAGGTGCTTCGTCGGGGGGCTCGCATGGGCCACCGACAGCGAGGCCCTTGAGAAGGCCTTTGCTCCCTTTGGCGAAATCGTCGAATCGAAGGTTATTAACGATCGTGAGACGGGCAGGTCAAGAGGGTTTGGATTCGTAACCTTCTCGTCTGAGCAGGCCATGAGAGATGCTATTGAGGGGATGAACGGCCAGGATCTCGATGGCCGTAATATTACTGTCAACGAGGCCCAATCCCGGGGCCGAGGCGGTGGTGGCGGCGGATTTGGCAGTGGAGGCGGATATGGCGGCGGCGGCGGCGGCGGATATAGCCGTGGTGGAGGCGGTTACGGAGGTGGAGGCCGCCGTGAAGGTGGATACAACCGTAACGGTGGTGGAGGCTATGGAGGAAGCGGCGGCGGCGGTTATGGTGGCGGACGTGACCGTGGTTATGGTGATGGTGGATCTCGTTACTCCAGAGGTGGAGGTGCTTCTGACGGAAGCTGGAGGAGCTAG 516 0.6008 MASAEIEYRCFVGGLAWATDSEALEKAFAPFGEIVESKVINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQSRGRGGGGGGFGSGGGYGGGGGGGYSRGGGGYGGGGRREGGYNRNGGGGYGGSGGGGYGGGRDRGYGDGGSRYSRGGGASDGSWRS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0140 171 MobiDBLite consensus disorder prediction 70 171 - -
Lele33g0140 171 SUPERFAMILY RNA-binding domain, RBD 9 118 IPR035979 GO:0003676
Lele33g0140 171 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Lele33g0140 171 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Lele33g0140 171 Gene3D - 2 123 IPR012677 -
Lele33g0140 171 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 6 152 - -
Lele33g0140 171 SMART rrm1_1 9 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0140 Lele-ChrLele33 885902 886700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0140 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 32.911 5.59e-06 43.9