Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0135 ATGTTGCGCTGTCTCAACTCCTCCAGCAATTTCACCGGAAACTGCTCCGACATGACGGTGTTGGAAAGGAAAAGGATGAGGATGAAATGGCAACAAGAGCAACAACAATATCACCAAAACCAGAGCTTTTATGGTGATTCTGCGCTCGGCGAGGTCGTCGCTAAGTCCATCAAGCCCGAGCTCAGCCAGCTCCACTTTCCCAGTTTCGGGTTCGGGTCGCCTGGCTTTGAAGCCAGTTCTGCAATTTCAACGACTTCCATGGCAGCAGCTGAAGAACCCAGAGGCAAAGACTCTGTTTCAGACAAGGAGAAGATGAGCTCTGCATGTGGGAAACACAGCTTCAAGAAGAGAAAATCCGACAAGGGTCATAGCTCTAAGGTTGTTGCAGAGAGTGAAAACAAACAGAAGAAGATGAAAGCAAGTGGAGAAGAAGGAGAATCGAAAATAACAGAGCAAAATAGCAGCAAGAACACAACAACCAACAAAGTTAACAGCAGCAAAGAAACATGTGGAGTAACCTCAAAGGGAAATTCGAAGGCGTCAGAGGTTCAAAAGACAGATTACATCCAAGTCCGAGCTCGGCGTGGCCAAGCCACTGACAGCCATAGCCTAGCAGAAAGAGTTAGAAGAGAAAAGATCAGTGAGAGAATGAAGCATTTGCAGGATTTAGTACCAGGTTGTAACAAAATCACAGGGAAAGCTGGAATGCTTGATGAGATCATTAACTATGTTCAATCTCTTCAACGCCAAGTAGAGTTCTTGTCCATGAAATTAGCTGTTGTAAACCCAGCACTTGACTTCAACCTTGATGATCTCTTCTCCAAAGAGGTTTTTAGTACTTGTGGTGGTCCAAGTTTTGCAACATTTGGGATGGGATCAGACATGAACAATCATCCATCAGCATATGTTCAGTTCAACAACTCAGGGCAACAACAACAGTTTCCTCTTTCTTCAATCCCCGAAACGTTTCTTGAATCCTGCTGTTTCCCTCATCTTCTACCATCTTCTACTTATGAATCTGATCTTCATAATCTAATCAATGTGGGGTTTGATCAACAACGAGCAGCAGCATCATCCTTTCTTTCTCAGCCATTCACAGGTGCAGTTGAAGCTAGCAATCCAAAGATGGAGATGTAG 1137 0.4442 MLRCLNSSSNFTGNCSDMTVLERKRMRMKWQQEQQQYHQNQSFYGDSALGEVVAKSIKPELSQLHFPSFGFGSPGFEASSAISTTSMAAAEEPRGKDSVSDKEKMSSACGKHSFKKRKSDKGHSSKVVAESENKQKKMKASGEEGESKITEQNSSKNTTTNKVNSSKETCGVTSKGNSKASEVQKTDYIQVRARRGQATDSHSLAERVRREKISERMKHLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAVVNPALDFNLDDLFSKEVFSTCGGPSFATFGMGSDMNNHPSAYVQFNNSGQQQQFPLSSIPETFLESCCFPHLLPSSTYESDLHNLINVGFDQQRAAASSFLSQPFTGAVEASNPKMEM 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0135 378 MobiDBLite consensus disorder prediction 94 110 - -
Lele33g0135 378 Pfam Helix-loop-helix DNA-binding domain 201 248 IPR011598 GO:0046983
Lele33g0135 378 Gene3D - 194 266 IPR036638 GO:0046983
Lele33g0135 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 247 IPR011598 GO:0046983
Lele33g0135 378 MobiDBLite consensus disorder prediction 84 183 - -
Lele33g0135 378 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 100 311 IPR024097 GO:0006355
Lele33g0135 378 MobiDBLite consensus disorder prediction 123 150 - -
Lele33g0135 378 SMART finulus 203 253 IPR011598 GO:0046983
Lele33g0135 378 MobiDBLite consensus disorder prediction 151 183 - -
Lele33g0135 378 FunFam Basic helix-loop-helix transcription factor 194 266 - -
Lele33g0135 378 CDD bHLH_AtBPE_like 187 272 - -
Lele33g0135 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 265 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0135 Lele-ChrLele33 861400 863430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0135 14 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 41.477 5.34e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele33g0135 HLH 6.3e-07 No_clan