Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0108 ATGATGGCAACAAATAGCTTTTGCTTCAGTGATCAGCTTACAGCTTTTACTTCCATAAGGCATCAAGAAGACGGTTTTGACAAAATGGCAACTTATTTGCCAAATTCATATTCCGACACACCGATTACCTCTAGTAATATAACCTTGTATATGAACTCTGGTTCGTATCCCGAAGCATTCTCTGGAAATTCTCAGGAGCAAAATGGCTGCTTTGTGATCCCACCAATGAGTTTGTCACAATCAGCCCCAGAACAGCAAGAAATCTTAGAAAATCTTGGTGGGTTACAAACTGGGGACTATGATTTCACTGCATGGAGACAAGGGAGAAATGAGATGCTAGTAACACATCCAATGGATGGACATAACTTGCAGAGCCAGGGATTATCTCTCAGCCTTGGAACCCAAACACCATCAGGAATCCAAGTGTCTTCTTTCCATGATCAAAGTTCTAACCCGAGTTTCGATTCATTTTTAGGTCAAAATCCATCGGTTTCGGGCCATAAAAGCAGCTCATCTAGGCATGAGTGTATGAGGCACAGTGAAATTTTACCTCCTGATTTACCTGAAGCTAGTCAAGTTTTGAATAGAGGGGATTATTCTTTGCATGGGATGCCAAATGTTTCAAGAACAATTCCAAATTCTAAGTACCTCAAGGCGGCACAAGAGCTACTTGATGAAGTTGTTGACATCCAAAAAGCAATGAAACAACCCAATGTGAAAAGTCCGAGCACACGCGAGAAGAAGACTTCTAAGGAGAATGATGGAAGACTAGAAAATGAAAGGGCACCTGCTAATGGAGAGCCTAACCCTCAAGATTTAGCCGGCAACACCTCTTGTGAGCTTTCGCATGCTGAAAAACAAGATCTGCAGAACAAGTTAACAAAGCTACTGTCAATGCTGGATGAGGTTCACAGTAGGTACAAACAATATTATCATCAGATGCAGATTGTGGTATCGTCATTTGATGTGGTAGCAGGACGTGGGGCAGCTAAACCATACACGGCTCTAGCTCTACAAACCATTTCGCGCCATTTCCGGTGCTTGCACGATGCAATCACTGGCCAGATCAGTGCAACACAGAAGTGCCTTGGAGAGCAAGATTCTGCAGGAAATAATAAAGGAGTTGGAATATCAAGACTCCGGTATGTTGACCAACAACTCCAGCAACAGAGGGCTCTTCAGCAGCTTGGAGTGATGCATCATGCATGGAGGCCACAAAGGGGACTACCAGAAGGCTCTGTTTCAATTCTTCGCGCTTGGCTTTTCGAACATTTCCTTCATCCCTACCCCAAAGATTCTGAAAAGGCAATGCTAGCTAGGCAGACAGGTTTGACTAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGAGTTCGTCTTTGGAAACCTATGATTGAGGAGATGTACAAAGAAGAAATTGCAGATGCCGACTTGCACTCCAGTTCTTCAACTGAAGATGCATCCAAGGTAAGCAAAAGCGATGTCAAAATTTCCGATGATGGGTGTGATGATTTACAACAGAGCCAGAATTCAATAGCAGCCGACAAGGCTAAGGACTTGAGATCTGATAAGCAAACTAAGGAGCAACAGCAAAGGCTCTGCTTTGATGACTGCAGTGTCTTCCAAGATGGCACAGCTGTTCAGACTAATGAAGGCGGTTCGGGGTTTGTAGCGGTTGCTCCGGCATGCCATATGTCCGAGTTGGGGAGGTTTCAGCCTGGAAACGGCGGTGTGTCGCTGACATTAGGTTTGCAGCATTGTGAAGTTGGTGATTTTATGTCCGGCGATATCCGTCATAGTTTCGTCGTCATGAGGGAGGATGGTATTTACAATGCGGCATCAGCTGCTACCATTGGAGCTCAGACATCAAAACTTGATTATGTGGCTGCTGGAAACCAGCACCAAAGCAGAAAGGATCTTATAGGAAGATCAGTTGATGGTTGCCTCAGTGTTGGCTTTAAATTTACAAAACGTTATTTGGGGAATCTGGATCTTCGTCCTATTGAAGCAGACCAGAACCTTGGCTTCAAGCATTCAAGTTGTGATGCAATCACAGCAAGCAAGCCAATAGAAGACTGA 2079 0.442 MMATNSFCFSDQLTAFTSIRHQEDGFDKMATYLPNSYSDTPITSSNITLYMNSGSYPEAFSGNSQEQNGCFVIPPMSLSQSAPEQQEILENLGGLQTGDYDFTAWRQGRNEMLVTHPMDGHNLQSQGLSLSLGTQTPSGIQVSSFHDQSSNPSFDSFLGQNPSVSGHKSSSSRHECMRHSEILPPDLPEASQVLNRGDYSLHGMPNVSRTIPNSKYLKAAQELLDEVVDIQKAMKQPNVKSPSTREKKTSKENDGRLENERAPANGEPNPQDLAGNTSCELSHAEKQDLQNKLTKLLSMLDEVHSRYKQYYHQMQIVVSSFDVVAGRGAAKPYTALALQTISRHFRCLHDAITGQISATQKCLGEQDSAGNNKGVGISRLRYVDQQLQQQRALQQLGVMHHAWRPQRGLPEGSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEEIADADLHSSSSTEDASKVSKSDVKISDDGCDDLQQSQNSIAADKAKDLRSDKQTKEQQQRLCFDDCSVFQDGTAVQTNEGGSGFVAVAPACHMSELGRFQPGNGGVSLTLGLQHCEVGDFMSGDIRHSFVVMREDGIYNAASAATIGAQTSKLDYVAAGNQHQSRKDLIGRSVDGCLSVGFKFTKRYLGNLDLRPIEADQNLGFKHSSCDAITASKPIED 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0108 692 SUPERFAMILY Homeodomain-like 405 470 IPR009057 -
Lele33g0108 692 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 144 486 - -
Lele33g0108 692 Pfam Associated with HOX 211 353 IPR006563 -
Lele33g0108 692 ProSiteProfiles 'Homeobox' domain profile. 400 463 IPR001356 GO:0003677
Lele33g0108 692 SMART prehox3 205 354 IPR006563 -
Lele33g0108 692 Coils Coil 286 306 - -
Lele33g0108 692 MobiDBLite consensus disorder prediction 476 496 - -
Lele33g0108 692 Pfam Homeobox KN domain 420 459 IPR008422 GO:0003677|GO:0006355
Lele33g0108 692 MobiDBLite consensus disorder prediction 241 261 - -
Lele33g0108 692 CDD homeodomain 403 464 IPR001356 GO:0003677
Lele33g0108 692 Gene3D - 399 477 - -
Lele33g0108 692 SMART HOX_1 403 467 IPR001356 GO:0003677
Lele33g0108 692 MobiDBLite consensus disorder prediction 234 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0108 Lele-ChrLele33 693112 698069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0108 81 591 Homeobox Transcription Factor Family AT4G34610 47.217 3.08e-129 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele33g0108 POX 1.3e-49 No_clan