Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0091 ATGCCCCCGATTTGCGATAGGTGGCTCGATTTCACCACAGGAATGACAAACCCTGCAGAGTATCCTCCTTCGCCCTCACGGTGCATCCCGTCGTTGTCGTCACCTTCCACCGTCGAAGACATGCCACTCGCCCGGAGAGATGACGCTGATGAAGCGAAGACCCTCCTACACTGTGACGAAGCGGAAGAGAAGCCCCCCTCTCCTTCTCTTCCACCTGCTTCCAGGGAAGTGTCAGAGGAAATCAATGTAGCTGACATTGCTGTGGAGACCAAGAGGTTGGAGGAGGAGGCAGGCGAGGCTGTCATGTCAAGTGAAAATGAGGAAGAGGAGAACGTAGTTTTGGGAACGGAGACAGCAGGCACGTATGCAGCTTGCAGCTTAGGCGAGGCAGCTGAATCAACGGAGGCATGGAAGGTGGAAGAGGAAACCAATGTAGCTAACATTGTTGAGGACATTACGAAGGCAGAAGAGGTAGCCTATATAGCTAACATTGCCGAGAACATTACAAAGGTGGAAGGGGAAACTGATGTAGCTAACGTTGCTGGGGATAATAAGCAGGTGGAAGAGGAAACTGATGTTGCTAACATTGCTGATGATAATACGGAGGTGGAAGAGGAAACTAATGTAGCTAACATCGCTGAGGACATTACAAAGGTGAAAGAGGACGTAGATGTAGCGGACATTGTTGAAGGGGAGGTAGATGAGGCCACCATGTCATATGAGAAAGAGGAGGCAGAAAAGGTTGTAGCTAGGATGGAGCCAGCAGACACATATGTGGCTTGTTCCCTAGGTGAGACAACTGAGGCGGTAGAGATCAGGGAGCTGGACGAAGAGGCAGGTGAAGATGGCATGCCAGATGAGAATGAGGAAGCTCAGAATGTAGCAGTGGGGATGGGGATGGAGATGGAAGATGGAACTGTCGCTTTCGCCCTTGGTCAGAGAACTGAAGCAGACGGAGTTGGCATAGAGGTTGAAGATAAGGAGGAGGCAGTAGAGGTGTTGAATGTGATTGGCACGGGGGAAGGTACAACTGACACAGAAGAGGATGCAGATGGAGCTGATGGAATGGATGGGGCCCTAGAGGCAGAAGAGGCGGAGGTAGCCAATGAAGCAGATTTGATGGAAGAGGAAGTAGATGTCGCTGAAATGGCAGATTATACAGCGGGTGCTGAGTTGACTGAGGAGATGGAGATGGCTGAGGAGCAAGGTAGAAGTGTCAGCAGTGGCAAGAGGAAGCGTGGGAAGAACTCAAAGTCTGCAGGGAGAGTTCAAGTTAGAAAAAAGGCGGAAGAGGATGTTTGTTTCATATGCTTTGATGGGGGTGAGCTTGTGCTTTGTGATCGCAGGGGATGCCCAAAGGCCTATCATCCTACATGTGTTAATCGTGACGATGCATTCTTTCGAGCAAAGGGTAGATGGAATTGTGGTTGGCATCTTTGCAGCAACTGTGGGAAGAATTCTTACTACATGTGCTATACCTGTACGTTCTCTTTGTGCAAGGGGTGCATCAAAGATGCTGTCATCCTGTGTGTTAGGGGAAAGAATGGCTTTTGCGAGACATGTATGAGGACTGTAGTGCTGATTGAACAGAATGAGCTGGGGAACAAGGACACGGGACAAGTGGATTTTGATGACAAAAGCAGCTGGGATTATCTCTTCAAGGACTACTACACAGATCTAAAAGGGAAGCTATCTTTAACATACGATGAGCTTGCTCAAGCTAAAAAACCATGGAAGGGATCTGATATCCTTCTTACCAAGCGGGAATCGCCTGATGAGCTCTATGATGCTAATAATGATGGGGGATCACATTCAGATAGCTCTTCTGAAAATGTTGAAAGCGGTAGTGTTAAAAGAAGAAAGGCCAATAAAAGATTGAAGTCCCGTTCCAAGGAGTTGAATTCGCATAGCACAATGACATTGGTTGGTGACCAAGGGCCATCTGCAGATAAGAGGTCTGAGTGGGCATCAAAAGAGCTTTTGGAGTTTGTTATGCACATGAGAAATGGTGACAAATCTATTCTGTCTCAGTTTGATGTGCAGGCTCTTCTGCTAGAGTATATTAAAAGAAACAAGCTCCGTGATCCTCGCCGAAAAAGTCAAATAATTTGTGATGCAAGGCTTCAAAATTTGTTTGGTAAACCAAGAGTGGGTCACTTTGAAATGTTAAAGCTTCTTGAATCCCATTTCCTACTAAAAGAAGATTCCCAGACTGAAGATCTACAGGGGAGTGTTGTTGATACTGAATTTAATCATTTGGAAGGTGATGGCAATATTGATTCCCATCTGAAGACTGGAAAAGACAAGAGACGTAAAACACGAAAAAAAAGTGATGAAAGAGGGCTTCAATCCAATATTGACGATTACGCGGCTATTGATAACCATAATATTAATTTAATTTATCTAAGACGCAATTTGGTGGAAGAATTACTTGAAGATAGAGATAAGTTTCATGATAAAGTTGTTGGGTCTTTTGTGAGAATAAGGATCTCTGGTAGTGGTCAGAAGCAAGACTTGTATAGGCTGGTTCAGGTTGTAGGAACATGCAAAGCAGCTGAGCCATATAAAGTTGGTAAAAGGATGACAGATACCCTGCTAGAAATCTTAAATTTAAACAAGATAGAGGTGGTATCAATTGATATAATCTCAAATCAAGAGTTCACAGAGGATGAATGCAAGCGTCTGCGCCAGAGTATAAAGTGTGGGTTGATAAATCGGCTGACAGTGGGTGATATTCAAGACAAAGCAATGGCACTTCAAGCGGTCAGAGTAAAAGATTGGCTAGAAACAGAGATAGTGAGACTAAGTCACCTCCGTGATAGAGCCAAATGTGTGGAGAAATTGCAGCTTTTAAAAACACCTGAGGAACGTCAACGAAGATTGGAGGAAATTCCAGAAATACACGCAGACCCTAACATGGATCCAAGTTATGAGTCTGAGGAAGAAGAAGAAGAAACTGATCCTAAACGGCTAGAGAGTTACATGAGACCTAGAGGAACTGCATTTGATCGAAGGGGGAGAGAAATGGTTTCTCCTAGAACACGTGGTTCTAATTCAAATGATTCATGGAGTGGAGCGAGGAACTATTCTAATATTAATCGTGAGTTAAGCAGGAATTTTTCTAATAAGGGGCTCTCAGTTAAAGTTGATGATGTGTCTAATGCTTCTGACGTATTGAATGATGTTCAAATCCTTCGGGGAAGAGATAGGGAAACACAACTATCTAACAGCTGGGAGGGGCAAAAGCTATATCCAAGCTTAGAAAGTAGTGGCAAAAGTATCCAGCCTGTGGTAACATCTGAGTCTCTTTCTACTACTGTGTCCAATGCCTCTGCTGTATCATCTACTGGCATAGCACTGCCTGCTGTGAAAATTAATGAAACAGAAAAGATGTGGCATTATAAGGATCCATCTGGAAAAATTCAGGGGCCATTTTCAATGGCACAGTTACGTAAATGGAATAACACTGGATATTTTCCTGCTGAGTTGAGAATTTGGAGAACCACTGAGAAACAAGATGAGTCTATACTCTTAACTGATGCCTTAGCTGGAAACTTTTCTAAGGAACCATCAGCAGTGGATAAAACTTTTCCGAAGGCTCAGATGGTGCATAATTTAAATGATGCAGCCTCACACTCTGGGAAGCTTCATTTGCCTGCACAACAAGGTTTAGATGCTCAAATTGGAGGAAGATCAACATTTGATCAGAGTAATGGGTCCTATAATTCACATAATGCTATGGGTTCTCTAGGCCAATCTACTGGAGGAAGTTGGAGATTTGAACATAATAATTCTGTAGCAAATAGGCCTTCTCCAATGACAGTTGAGATTCCCAAGATCCCTACAAATGTTCGGGGCCCCGATGTTGGTGTTAGAATTGACTCAATGAATCTTCCTTCACCTACCCCTCAGACTACCTCTTATGGGACTAAAGGGCAGGCTTTTGAAAGTAAATGGTCACCAACTCCTGTCCACTCTTCAGGTTCTCTTGTAGGGAGTCCTTTTCCTGGAGGTCATGGAAGCTTGCAGGCCCCTGTCGCTGCAGAGAAAGTGGTGCAAAGTGCTGAAAGTGGTTCAAGTTCACAACCTGCTAATATTCCAGCTCTAAATCCTGGCATTCCTCTTGGCCATCCTCAAGCAACAATGGTGGCAGCTATTACAGCAGATGCCTCAAGAAATACAGGTGCCGACAGTAAAACTGCAAGTATGCAAAACTTGGCTATGAACGACCATAATTCTCATGTTGAAGCTCAAGGTTGGGGATCTGGTTTAGTTCAGAAACCTGAAATGGCTGGTTCAATTCAGATACGAGGGGGTGAACCACAGGCCTGGGGAGGTGTCCATTCAGTAGTAGAATCAAATAATCCTGCTGCTATGCCTGCCCAACCACTGCTGGCTCATGGCCACTGGGCCGATGCTTCATCTATCCAGAATGCTGCCTCGTTTAACACTGGAAATCCAATGGGGAATTTCCCCATGCAAGGCATTCAAGACTTGAGACCACCGAGTTCAAGTAATCAACCTAACATTCCTGCATCTCTGCCACCCAACATGCCTTGGGGCATGACTGTTGCAGAAAATCAAAGTACTAGTTGGGGGGTAATGCCTGGAAATCCAAATCTAAATTGGGGGGGACCTCCAGCTGCCAACATGAACATGAATTGGATGCCTGGCCAGAGTCCAGCACCAGGAAACGCAAATCCAGGATGGGCTGCTCCCAATCAGGGACCATCTTTAGTAATGCCTACTGGTTGGGTTGCACCTGGTCAAGGCCATCCTAATGCTAATGGAGGTTGGGTTGCACCTGGTCAAGGTCCGGCACCTGTTGGTGCTAATCCTGGTTGGGCTGCGCCGGCTGGGGCCCAAGGCTTGTGGGGAAATGAACAAAATCATAATGGAGACAGGTTCCCAAACCATAGGGATCGTGGTCCTCATGGTGGTGAATCAGGTTATGGAGGAGATAAAACATGGAACAGGCAGTCTTCATTTGGTGGCGCCACCGGCCGGGGAGGAGGTTCTTCAGGGCCTCCTTTTGGGGGGCAGCAGAGAGGAGTGTGCAGGTTCCACGAGAGTGGACATTGCAAGAAAGGGGCTTTTTGTGACTATCTGCACAACTGA 5118 0.4574 MPPICDRWLDFTTGMTNPAEYPPSPSRCIPSLSSPSTVEDMPLARRDDADEAKTLLHCDEAEEKPPSPSLPPASREVSEEINVADIAVETKRLEEEAGEAVMSSENEEEENVVLGTETAGTYAACSLGEAAESTEAWKVEEETNVANIVEDITKAEEVAYIANIAENITKVEGETDVANVAGDNKQVEEETDVANIADDNTEVEEETNVANIAEDITKVKEDVDVADIVEGEVDEATMSYEKEEAEKVVARMEPADTYVACSLGETTEAVEIRELDEEAGEDGMPDENEEAQNVAVGMGMEMEDGTVAFALGQRTEADGVGIEVEDKEEAVEVLNVIGTGEGTTDTEEDADGADGMDGALEAEEAEVANEADLMEEEVDVAEMADYTAGAELTEEMEMAEEQGRSVSSGKRKRGKNSKSAGRVQVRKKAEEDVCFICFDGGELVLCDRRGCPKAYHPTCVNRDDAFFRAKGRWNCGWHLCSNCGKNSYYMCYTCTFSLCKGCIKDAVILCVRGKNGFCETCMRTVVLIEQNELGNKDTGQVDFDDKSSWDYLFKDYYTDLKGKLSLTYDELAQAKKPWKGSDILLTKRESPDELYDANNDGGSHSDSSSENVESGSVKRRKANKRLKSRSKELNSHSTMTLVGDQGPSADKRSEWASKELLEFVMHMRNGDKSILSQFDVQALLLEYIKRNKLRDPRRKSQIICDARLQNLFGKPRVGHFEMLKLLESHFLLKEDSQTEDLQGSVVDTEFNHLEGDGNIDSHLKTGKDKRRKTRKKSDERGLQSNIDDYAAIDNHNINLIYLRRNLVEELLEDRDKFHDKVVGSFVRIRISGSGQKQDLYRLVQVVGTCKAAEPYKVGKRMTDTLLEILNLNKIEVVSIDIISNQEFTEDECKRLRQSIKCGLINRLTVGDIQDKAMALQAVRVKDWLETEIVRLSHLRDRAKCVEKLQLLKTPEERQRRLEEIPEIHADPNMDPSYESEEEEEETDPKRLESYMRPRGTAFDRRGREMVSPRTRGSNSNDSWSGARNYSNINRELSRNFSNKGLSVKVDDVSNASDVLNDVQILRGRDRETQLSNSWEGQKLYPSLESSGKSIQPVVTSESLSTTVSNASAVSSTGIALPAVKINETEKMWHYKDPSGKIQGPFSMAQLRKWNNTGYFPAELRIWRTTEKQDESILLTDALAGNFSKEPSAVDKTFPKAQMVHNLNDAASHSGKLHLPAQQGLDAQIGGRSTFDQSNGSYNSHNAMGSLGQSTGGSWRFEHNNSVANRPSPMTVEIPKIPTNVRGPDVGVRIDSMNLPSPTPQTTSYGTKGQAFESKWSPTPVHSSGSLVGSPFPGGHGSLQAPVAAEKVVQSAESGSSSQPANIPALNPGIPLGHPQATMVAAITADASRNTGADSKTASMQNLAMNDHNSHVEAQGWGSGLVQKPEMAGSIQIRGGEPQAWGGVHSVVESNNPAAMPAQPLLAHGHWADASSIQNAASFNTGNPMGNFPMQGIQDLRPPSSSNQPNIPASLPPNMPWGMTVAENQSTSWGVMPGNPNLNWGGPPAANMNMNWMPGQSPAPGNANPGWAAPNQGPSLVMPTGWVAPGQGHPNANGGWVAPGQGPAPVGANPGWAAPAGAQGLWGNEQNHNGDRFPNHRDRGPHGGESGYGGDKTWNRQSSFGGATGRGGGSSGPPFGGQQRGVCRFHESGHCKKGAFCDYLHN 1705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0091 1705 MobiDBLite consensus disorder prediction 1625 1683 - -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 1012 1027 - -
Lele33g0091 1705 CDD GYF 1129 1184 IPR003169 GO:0005515
Lele33g0091 1705 Gene3D SWIB/MDM2 domain 644 740 IPR036885 -
Lele33g0091 1705 SUPERFAMILY FYVE/PHD zinc finger 418 479 IPR011011 -
Lele33g0091 1705 FunFam Zinc finger CCCH domain-containing protein 19 1131 1188 - -
Lele33g0091 1705 SMART gyf_5 1130 1185 IPR003169 GO:0005515
Lele33g0091 1705 ProSiteProfiles Zinc finger PHD-type profile. 431 497 IPR019787 -
Lele33g0091 1705 Gene3D - 1130 1189 IPR035445 -
Lele33g0091 1705 Coils Coil 226 246 - -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 594 650 - -
Lele33g0091 1705 Gene3D - 793 921 IPR036128 GO:0003677
Lele33g0091 1705 MobiDBLite consensus disorder prediction 41 64 - -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 757 780 - -
Lele33g0091 1705 ProSiteProfiles Plus3 domain profile. 791 924 IPR004343 GO:0003677
Lele33g0091 1705 FunFam Zinc finger CCCH domain-containing protein 19 423 523 - -
Lele33g0091 1705 ProSiteProfiles SWIB/MDM2 domain profile. 649 732 IPR003121 -
Lele33g0091 1705 SMART rtf1 791 901 IPR004343 GO:0003677
Lele33g0091 1705 SUPERFAMILY Plus3-like 792 921 IPR036128 GO:0003677
Lele33g0091 1705 MobiDBLite consensus disorder prediction 1006 1027 - -
Lele33g0091 1705 Pfam Plus-3 domain 796 899 IPR004343 GO:0003677
Lele33g0091 1705 ProSiteProfiles GYF domain profile. 1129 1183 IPR003169 GO:0005515
Lele33g0091 1705 ProSiteProfiles Zinc finger C3H1-type profile. 1680 1705 IPR000571 GO:0046872
Lele33g0091 1705 SUPERFAMILY SWIB/MDM2 domain 654 731 IPR036885 -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 397 423 - -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 1297 1329 - -
Lele33g0091 1705 Pfam SWIB/MDM2 domain 657 730 IPR003121 -
Lele33g0091 1705 ProSitePatterns Zinc finger PHD-type signature. 434 494 IPR019786 -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 1654 1668 - -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 1296 1330 - -
Lele33g0091 1705 CDD SWIB-MDM2_like 655 730 - -
Lele33g0091 1705 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 420 524 IPR013083 -
Lele33g0091 1705 SUPERFAMILY GYF domain 1122 1182 IPR035445 -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 961 975 - -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 961 990 - -
Lele33g0091 1705 FunFam Zinc finger CCCH domain-containing protein 19 642 737 - -
Lele33g0091 1705 Pfam GYF domain 1132 1174 IPR003169 GO:0005515
Lele33g0091 1705 SMART swib_2 664 735 IPR019835 -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 1633 1648 - -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 16 78 - -
Lele33g0091 1705 FunFam Zinc finger CCCH domain-containing protein 19 792 921 - -
Lele33g0091 1705 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 341 1705 - -
Lele33g0091 1705 MobiDBLite consensus disorder prediction 1229 1256 - -
Lele33g0091 1705 SMART PHD_3 433 479 IPR001965 -
Lele33g0091 1705 CDD PHD5_NSD 433 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0091 Lele-ChrLele33 558397 569313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0091 389 502 PHD Transcription Factor Family AT5G58610 28.000 6.31e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Lele33g0091 Plus-3 2.9e-23 No_clan