Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0078 ATGGGCGATACTGAAGAAGCCCATACTGACATGATGCATAATCTTCAATCCTCGTTCGGAACTTCATCATCTTCGATTATGAACCAACCTTTAAGTATGGACCAACTCAGTGTACCTCAATTCAACCCCTCACAAATGCGAGCGCGGCATTTTCAGCAGAATTTTGGCGGGGATGGTAATAATAATAAAAGAGTGGGCATACCACCATCGCATCCCCACCAGATCCCACCGATCTCGCCATATTCCCAGATCCCTGTGTCGCGACCCACGTCACAGCAAAATGTTAGCCCAGTACCTACTCATTCGCGATCATTATCACAGCCGCCATTTTTCTCGCTCGATTCTCTGCCTCCCTTAAGTCCTTCTCCTTTTCGAGACTCGACTTCAACTTCCATGTCAGACCCTGCTTCGGCTGATGTATCTATGGAGGATCGGGATGTAAGTTCGCATTCTTTATTGCCTCCTTCACCTTTTACAAGGGGTAATCCTTCGCGGGTGGGAGAAAGTTTACCCCCGCGTAAAGCGCATAGGCGCTCTAACAGTGATATTCCATTTGGCTTTTCTACTGGAATGCAATCTTCGCCTCCTCTTATTCCACTAAGGGGTTCTGGTGGACTGGATAGGTCATTGTCTGGGAGAGAAAATTCAGGTGTAGGTTTAGCGAAGTCTGCACAATTAGTTAAAAGGGAAACAAGTTGGGACAGAATTGTTGTTGACCACAATATAGAGGGATCAGGTGAGAAGAAATCCCCTGAAGGGGAAGTTGTGGATGATCTTTTCTCTGCATACATGAACTTGGATAACATTGATGCACTTAACTCTTCGGGGACTGATGACAAAAATGGTAATGAAAATCGTGATGATTTGGATAGTAGAGCGAGTGGAACAAAGATAAATGGAGGTGATAGCAGTGATAATGAAGCAGAAAGCAGTGTTAACGAAACCGGGGCCAACATGCAAAGACAGGGAACCAAATCTTCGAATGAAATGAAGGAAGGGGTGAAAAGGAGCGCGGGAGGAGATATCGAACCCTCCACAAGGCACTACAGAAGTGTCTCAATGGATAGTTTCATCGGGAAGCTAAACTTTACTGATGACTGCCTTAAACTGCCACCTTCTCCAGGTCCTCGTCCTGGACAGATTTCTCCCACCAATTCAATTGATGGTAATTCATCTGCCTTTAGCTTGGAGTTTGGAAATGGAGAATTTAGTGGGCCTGAGTTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCTTTAACAGATCCAAAGCGGGCAAAAAGGATTTTGGCAAATAGACAATCAGCTGCACGTTCTAAAGAACGAAAGATGCGGTACATTTCTGAACTAGAACACAAGGTTCAGACTCTGCAGACAGAAGCTACCACGCTGTCCGCACAGCTGACCTTGTTACAGAGAGATTCCGTGGGGCTCACAAACCAGAATAACGAGTTGAAGTTTCGCCTTCAAGCCATGGAACAGCAGGCAAAACTCCGAGATGCACTAAATGAAGCTCTAACTGCTGAAGTTCAACGACTTAAACTCGCCACGGCTGAGTTGAACGGCGAATCCCATGCTTCTGGCTGCATGATCCCGCAGCATTCTATCAACCCTCAGCTGTTCCAGTCTCAGAGGCAGCGACCACAGATATGCCAACCAACCATTCAGATGCAGCATCAGCAGAACAGTAGTGCCACCTCGAAGACCGACTCAAAACAGTAG 1728 0.4618 MGDTEEAHTDMMHNLQSSFGTSSSSIMNQPLSMDQLSVPQFNPSQMRARHFQQNFGGDGNNNKRVGIPPSHPHQIPPISPYSQIPVSRPTSQQNVSPVPTHSRSLSQPPFFSLDSLPPLSPSPFRDSTSTSMSDPASADVSMEDRDVSSHSLLPPSPFTRGNPSRVGESLPPRKAHRRSNSDIPFGFSTGMQSSPPLIPLRGSGGLDRSLSGRENSGVGLAKSAQLVKRETSWDRIVVDHNIEGSGEKKSPEGEVVDDLFSAYMNLDNIDALNSSGTDDKNGNENRDDLDSRASGTKINGGDSSDNEAESSVNETGANMQRQGTKSSNEMKEGVKRSAGGDIEPSTRHYRSVSMDSFIGKLNFTDDCLKLPPSPGPRPGQISPTNSIDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAKLRDALNEALTAEVQRLKLATAELNGESHASGCMIPQHSINPQLFQSQRQRPQICQPTIQMQHQQNSSATSKTDSKQ 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0078 575 FunFam probable transcription factor PosF21 425 478 - -
Lele33g0078 575 Coils Coil 505 525 - -
Lele33g0078 575 SMART brlzneu 422 486 IPR004827 GO:0003700|GO:0006355
Lele33g0078 575 MobiDBLite consensus disorder prediction 328 343 - -
Lele33g0078 575 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 115 570 - -
Lele33g0078 575 Coils Coil 442 497 - -
Lele33g0078 575 Gene3D - 425 477 - -
Lele33g0078 575 CDD bZIP_plant_RF2 427 476 IPR044759 GO:0003700|GO:0006355
Lele33g0078 575 Pfam bZIP transcription factor 426 480 IPR004827 GO:0003700|GO:0006355
Lele33g0078 575 SUPERFAMILY Leucine zipper domain 426 477 IPR046347 GO:0003700|GO:0006355
Lele33g0078 575 MobiDBLite consensus disorder prediction 372 393 - -
Lele33g0078 575 MobiDBLite consensus disorder prediction 296 327 - -
Lele33g0078 575 MobiDBLite consensus disorder prediction 84 113 - -
Lele33g0078 575 MobiDBLite consensus disorder prediction 272 347 - -
Lele33g0078 575 MobiDBLite consensus disorder prediction 121 137 - -
Lele33g0078 575 MobiDBLite consensus disorder prediction 51 220 - -
Lele33g0078 575 MobiDBLite consensus disorder prediction 182 196 - -
Lele33g0078 575 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 424 487 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0078 Lele-ChrLele33 481924 485279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0078 1 544 bZIP Transcription Factor Family AT4G38900 60.746 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele33g0078 bZIP_1 7.5e-09 CL0018