Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0067 ATGATTCGAGCATTGACGAATAGCTTACTCAACAATCTCAAGAGGCCAGGACCTGATCAAATAAGAGAGATAAGCTGTATAAATATCCGTTTCGGGTGGGACAAAATGAGATGGAGGCTTCATGGATTCACAATCGCCCAACTCTTCTCAGAAGATCAGTGTAGCAGGAGGTCTGTTGAAAACCAAGATGCAAACATGTCTATAAGATGTGGAAGTCAGATGTGGAAGGCAGCTTTGACAGAGCTAATAGCAACATCATGGTTACTGTTCACCTTGACCACTTCCATTGTAGCTTGCTTGGACTCACACGAGACTGATCCAAAGCTTCTCGTTCCTTTTGCAGTATTCGTCATCGCCTTCCTCTTCTTACTGCTCACCGTCCCTCTCACTGGGGGCCACATGAGCCTAGTTTTCACTTGTATCGCTGCTCTCAAGGGTTTTATAACTCTTTCTCGTGCCCTTGTCTACATATTCGCACAATGCATTGGATCAATTATGTGCTTTATGGAAGTGTGGAAGTAG 522 0.4444 MIRALTNSLLNNLKRPGPDQIREISCINIRFGWDKMRWRLHGFTIAQLFSEDQCSRRSVENQDANMSIRCGSQMWKAALTELIATSWLLFTLTTSIVACLDSHETDPKLLVPFAVFVIAFLFLLLTVPLTGGHMSLVFTCIAALKGFITLSRALVYIFAQCIGSIMCFMEVWK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0067 173 SUPERFAMILY Aquaporin-like 74 169 IPR023271 -
Lele33g0067 173 Pfam Major intrinsic protein 73 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0067 173 Gene3D Glycerol uptake facilitator protein. 45 172 IPR023271 -
Lele33g0067 173 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0067 173 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0067 173 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0067 173 PANTHER AQUAPORIN-LIKE 71 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0067 Lele-ChrLele33 423465 424728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0067 76 169 Major Intrinsic Protein MIP AT3G26520 35.000 9.88e-06 42.7