Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0060 ATGGATTGTACAGCTGCTAGAAAAACTCAAAAGGCTGACAGAGAAAAACTGAGGAGGGACCGGCTCAATGAGCAGTTTGTAGAATTGGGTAGCATTTTAGATCCTGATAGGCCAAAAAATGACAAAGCAACCATTCTTGCTGATACAGTCCAATTGCTGAAGGACCTTACTTCGCAAGTTAGTAAACTCAAAGAGGAATATGCTATGCTGACTGAAGAATCCCAAGAGGAGAAAAATGATCTTAGGGAAGAGAAGGCTTCTCTTAAATCAGACATTGAGAGCTTGAATAACCAATACCAGCAACGAGTCAGGACCATGTTCCCTTGGACTGCAATGGATCACTCAGTTATGATGGCCCCACCTTCATATCCATATCCAGTGCCAGTGCCTGTGCCAGTCCCTCCTGGTCCAATTCCCATGCAGCCATACCCCTTCTTTGCAAATCAAAATCCTGGGGTCATCCCAAATCGGTGCTCAACATTCGCTCCTTATCTAGCCCCTAATACTCTTGTTGAACATCAGTCCACACAATATGTAACGCCCCCACTTCATCCAGGTAGCCATTCCCATGCGACAGGAACACAAGATTCCAGAAACAAATCATCCAAGGAGAGCAAGGTTGAAAATGATGAATGTGCTAATGATGTCACCACAGACCTGGAGTTGAAAACTCCTGGATCTACGACAGATCAGGAGTTGTCATCTGGGCAAAGAAAATCCAGCAGGTTGTCCACGAACACAGAAGGGAGTTCATCCCGTAGGTGTTCTTCCTCTCGCAGCTTACAGGATAGCTCATCAAGTAGGCAAGTTTTCCTGGGGACTACGTCGCTTTGGTTCTCTATTACTGCCTGGGAAGGTCTTACAAGCAGTCTGACGTGTTGGGTTGTCCAAGTGTATGGGAATACGCTGGGTCCAAGTGTACGAGGATATTGGCTTTGCAGCGAGAGAGAGGTCAGAGATGGAATGGTTGTATCCCAAGAGGAGGAAACCGGGCTGGACAGGGCAGGCCATGTCCTCCTTTTCTGCTCCTTCACTCCATTTCCTCATGATATTTGGCTTGTCGTTAGCTTGTTGTGGTTCTCCCAATCCTCAGATTACAAAACTCAGCTTCATCATACGGCCATTAACATACACTTATTCCTCTTGCTATCGCCCATCTTACTCATATTCATAATTATTTCATATTGTTCGAGTAGAAGGTTCAGTTTCCGTCTGTCAACCCAATCTAAGCAAGACTCACTCCAACGAGCTGCAGTGTCCTTTGTCTCTTCTTGGAGCATAGCCGTCTTGCTGCTTTTGCTTTGGTACCAATCTTCATTTCAGTCAAATTGGTTTGGGGCCTCTGAAGCTCAGCCTACTTGCCATACATAA 1371 0.4581 MDCTAARKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILADTVQLLKDLTSQVSKLKEEYAMLTEESQEEKNDLREEKASLKSDIESLNNQYQQRVRTMFPWTAMDHSVMMAPPSYPYPVPVPVPVPPGPIPMQPYPFFANQNPGVIPNRCSTFAPYLAPNTLVEHQSTQYVTPPLHPGSHSHATGTQDSRNKSSKESKVENDECANDVTTDLELKTPGSTTDQELSSGQRKSSRLSTNTEGSSSRRCSSSRSLQDSSSSRQVFLGTTSLWFSITAWEGLTSSLTCWVVQVYGNTLGPSVRGYWLCSEREVRDGMVVSQEEETGLDRAGHVLLFCSFTPFPHDIWLVVSLLWFSQSSDYKTQLHHTAINIHLFLLLSPILLIFIIISYCSSRRFSFRLSTQSKQDSLQRAAVSFVSSWSIAVLLLLLWYQSSFQSNWFGASEAQPTCHT 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0060 456 CDD bHLH_AtILR3_like 11 82 - -
Lele33g0060 456 Coils Coil 46 98 - -
Lele33g0060 456 PANTHER TRANSCRIPTION FACTOR BHLH121 2 268 IPR044579 GO:0003700|GO:0055072
Lele33g0060 456 MobiDBLite consensus disorder prediction 220 261 - -
Lele33g0060 456 MobiDBLite consensus disorder prediction 197 217 - -
Lele33g0060 456 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Lele33g0060 456 Gene3D - 2 68 IPR036638 GO:0046983
Lele33g0060 456 MobiDBLite consensus disorder prediction 178 196 - -
Lele33g0060 456 Coils Coil 5 25 - -
Lele33g0060 456 SMART finulus 12 62 IPR011598 GO:0046983
Lele33g0060 456 MobiDBLite consensus disorder prediction 178 261 - -
Lele33g0060 456 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 74 IPR036638 GO:0046983
Lele33g0060 456 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0060 Lele-ChrLele33 396792 400075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0060 1 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 58.800 6.10e-84 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele33g0060 HLH 2.6e-09 No_clan