Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0058 ATGGCAAACCCTAAGGTCTACTTCGACATAACTATCGGTGGCCAGCCCGCCGGTCGCGTTGTAATGGAGCTCTTTGCGGATACCACCCCAAAGACTGCAGAGAACTTTCGTGCCCTCTGCACCGGCGAGAAGGGAGTCGGCCTCAGCGCAAAGCCCCTTCACTACAAGGGTTCCATCTTCCACCGTGTGATCCGAGACTTCATGTGCCAGGGCGGCGACTTCACCGCCGGGAACGGCACCGGCGGCGAGTCGATTTACGGCAACAAGTTCGAGGACGAGAACTTCGAGAGGAAGCACACCGGTCCCGGAGTGCTGTCCATGGCCAATGCGGGACCCGGTACCAACGGGTCGCAGTTCTTCATTTGCACGGCCCAAACGTCGTGGCTGGACGGCAAGCACGTGGTGTTTGGTCAGGTGGTGGAAGGCATGGATGTGGTGAGGGAGGTGGAGAAGGTCGGGTCAAGTCAACTGCGGTCCAGTTCCCGTGACTCGAGGCTTTCCATACAGGACACCTGGACAATCTTCTTTCTTCTTTGGTTTAATTTCCCTGGAGGGATTTCGATTCGATCCCTTCTTGGCGGGAAAGCTGATCACGACGACGTCCTTGTCGTTGTCTTCCACAATTCAATTGAAGTTGACAGGGACCGAGACACAGAGATGGGAGTTTCCGAGAATTCCAAGGGTTTGATACTGGCTGTTGCATCTAGTGTATTCATAGGGGCAAGTTTTATCTTGAAGAAGAAGGGTCTTAAGCGTGCCGGTGCCCACGGTACTCGCGCAGGAGGTGGTGGCTATACTTACCTACTAGAGCCACTATGGTGGGCTGGCATGGTGACTATGATTATTGGGGAGGTTGCGAATTTTGTGGCTTATATCTATGCTCCAGCAGTTCTGGTTACCCCCCTTGGAGCTCTGAGCATCATTGTCAGTGCTGTTTTGGCTCACTTCTTATTAAAGGAACAGCTTCAGAAGATGGGGGTATTGGGATGTATATCCTGTATTGTAGGATCAGTGGTTATTGTTATTCATGCACCTCAAGAACAAACTCCAAATTCAGTACAAGAAATATGGGATCTGGCCACTCAACCAGCATTTCTAGTTTATGTAGTGGCAACAATTTCAGTAGTTTTAGCTTTGATTTTGCACTTTGAACCTCACTATGGACAGACTAATATGCTGGTTTACTTGGGAATTTGTTCTCTGATGGGCTCACTTACGGTTGTGAGCATAAAGGCCATTGGAATTGCAATTAAGCTTACACTTGAGGGAATTAATCAAATAACTTATCCGCAGACTTGGTTTTTTCTCACAGTGGCAACAATATGTGTCATTACCCAGTTGAATTACCTGAACAAGGCTCTAGATACATTCAACACAGCAATTGTTTCTCCTGTATATTATGTCATGTTCACAACTCTGACTATTATTGCCAGTGCAATAATGTTTAAGGATTGGTCGGGTCAGAATGCCAACAGCATAGCATCTGAGGTATGTGGTTTCATCACCGTTCTTTCAGGAACAATAATACTGCATGCGACAAGAGACGAGGAACAATCTAACATGCAAGGGACCTTGACGTGGTTCATTGGTGAGGATTCAATGAAGGGCCTCGAGGATGAACACCTGATCCTCATACATGGTTCGGAATATCTTGAACATTGA 1662 0.4813 MANPKVYFDITIGGQPAGRVVMELFADTTPKTAENFRALCTGEKGVGLSAKPLHYKGSIFHRVIRDFMCQGGDFTAGNGTGGESIYGNKFEDENFERKHTGPGVLSMANAGPGTNGSQFFICTAQTSWLDGKHVVFGQVVEGMDVVREVEKVGSSQLRSSSRDSRLSIQDTWTIFFLLWFNFPGGISIRSLLGGKADHDDVLVVVFHNSIEVDRDRDTEMGVSENSKGLILAVASSVFIGASFILKKKGLKRAGAHGTRAGGGGYTYLLEPLWWAGMVTMIIGEVANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEQLQKMGVLGCISCIVGSVVIVIHAPQEQTPNSVQEIWDLATQPAFLVYVVATISVVLALILHFEPHYGQTNMLVYLGICSLMGSLTVVSIKAIGIAIKLTLEGINQITYPQTWFFLTVATICVITQLNYLNKALDTFNTAIVSPVYYVMFTTLTIIASAIMFKDWSGQNANSIASEVCGFITVLSGTIILHATRDEEQSNMQGTLTWFIGEDSMKGLEDEHLILIHGSEYLEH 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0058 553 SUPERFAMILY Cyclophilin-like 2 155 IPR029000 -
Lele33g0058 553 CDD cyclophilin_ABH_like 4 153 - -
Lele33g0058 553 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 156 IPR002130 GO:0000413|GO:0003755
Lele33g0058 553 SUPERFAMILY Multidrug resistance efflux transporter EmrE 271 343 - -
Lele33g0058 553 Pfam Magnesium transporter NIPA 225 515 IPR008521 GO:0015095|GO:0015693|GO:0016020
Lele33g0058 553 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 173 IPR002130 GO:0000413|GO:0003755
Lele33g0058 553 FunFam Peptidyl-prolyl cis-trans isomerase 1 173 - -
Lele33g0058 553 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Lele33g0058 553 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 IPR002130 GO:0000413|GO:0003755
Lele33g0058 553 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 IPR002130 GO:0000413|GO:0003755
Lele33g0058 553 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 IPR002130 GO:0000413|GO:0003755
Lele33g0058 553 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 IPR002130 GO:0000413|GO:0003755
Lele33g0058 553 PANTHER UNCHARACTERIZED 225 520 IPR008521 GO:0015095|GO:0015693|GO:0016020
Lele33g0058 553 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 IPR020892 GO:0003755|GO:0006457
Lele33g0058 553 Gene3D - 1 171 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0058 Lele-ChrLele33 384453 390380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0058 18 152 U-box Gene Family AT5G67530 48.529 1.22e-27 115