Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0047 ATGCTGCCAGCAGCTGCCGGCGCACATGTTGTAGACGGTGACGCCGTCGCAAGCAATGATGACGGGGAGAAGGCGGGGGTCGTTGTGGGTCAGGCCGGAGATCAATCTCGTGATCATCTCCTTAATCAAGACTTTTCCCTCGGAGTAATCGGGGTCATCCTTCTGGATCACCACTTTGACTGGGAGGGGACCGGGTGGTCTATTGGCGAAGGTTTGGTAGCTCTCGATGACCTTCCACCATGTGGCAACGTTGGGCATGGTCACCCTTTCAGCGTTGATGGACTTGATGAAGGCCAGAATCTTGTTCCTCTGCACCTTGCTGACGTTGCCATACCACAAAATGGCCAGGTCGATGTTGCCGGTGAGCAGATCGCCGTCGTTGTAAACGAGGGGAGGGGAAATGGTTCGAGCCTTCTTGGAACGGCCGGATCAACACAACTCCGAATCCCCGAAAAGCAATTGTTATTGGATCTGACCTTGAGATGTTGGCCCAAATGGATCAAGGCCCAGGCAGTGAACATATTAAGCCACTCCCTCACTCCCATGCCCATTCAATTCAAAAGATTCGGCAAAGGGGATGCCAATTTTCTTACCCATTATGTACTTTTCTGCAACTCTAGTGTAGAGACTGTTCTGCATATCCTACATGATTGTTCTTATGCTAGACATGTTTGGATGCAACTTAGTAAAGCCAGTAAAAAAGCCCCAACCGAGGAAGCTCGCTGCCAAGGAGCACCACAAAATTGCTATAATTTGATGGTTGGTTCTTCCGAAGAAGAGGGTGACAAAGCAATGAGGAAAGAGATGTCCTTTCTTGCCCAACCGCGATGCCTCCTTTTATTCCTCGTTCTTTCAGTTTTTCTGATTTTCGCCTTCTCTGTCTCTAAGCGGGTTGAGGAGAAACCAGAAGAGGAGCCTGAAATTACACACAGAGTATTCTTGGATGTTGATATCGATGACCAACGATTAGGTAGGATCATTATTGGATTATATGGCCAAGTTGTACCAAAAACTGCGGAGAATTTCAGAGTTTTGTGCACAGGGGAGAAAGGCAGGAGTTCCAATGGAATAAAACTTCATTATAAAGGAACACAATTTCATCGCATAATATCTGGTTTCGTGATTCAGGGCGGAGACATTGTTCATAAAGATGGCAGTGGATATGAATCTATTTACGGTGGCACCTTTCCTGATGAGAATTTCAGTATAAAACATTCACATGCTGGGGTTGTCTCTATGGTGAATTCTGGACCTGATTCCAATGGCTCACAGCTTTTTATCACCACCGTGAAGGCTAGCTGGTTGGATGGAGAACACGTTGTATTTGGGAAGGTAATAGAAGGTATGGATATTGTGTTTGCCATAGAAGGGGGAGCCGGAACCTACAGTGGTAAACCCAGGAAGAAAGTAGTAATATCCGACTCCGGAGAGATACCACGGAGCCAGTGGGAGGAGCAAGGGCGAATTTCCTTGTCACAGTGA 1482 0.473 MLPAAAGAHVVDGDAVASNDDGEKAGVVVGQAGDQSRDHLLNQDFSLGVIGVILLDHHFDWEGTGWSIGEGLVALDDLPPCGNVGHGHPFSVDGLDEGQNLVPLHLADVAIPQNGQVDVAGEQIAVVVNEGRGNGSSLLGTAGSTQLRIPEKQLLLDLTLRCWPKWIKAQAVNILSHSLTPMPIQFKRFGKGDANFLTHYVLFCNSSVETVLHILHDCSYARHVWMQLSKASKKAPTEEARCQGAPQNCYNLMVGSSEEEGDKAMRKEMSFLAQPRCLLLFLVLSVFLIFAFSVSKRVEEKPEEEPEITHRVFLDVDIDDQRLGRIIIGLYGQVVPKTAENFRVLCTGEKGRSSNGIKLHYKGTQFHRIISGFVIQGGDIVHKDGSGYESIYGGTFPDENFSIKHSHAGVVSMVNSGPDSNGSQLFITTVKASWLDGEHVVFGKVIEGMDIVFAIEGGAGTYSGKPRKKVVISDSGEIPRSQWEEQGRISLSQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0047 493 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 361 378 IPR020892 GO:0003755|GO:0006457
Lele33g0047 493 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 311 478 - -
Lele33g0047 493 Gene3D - 297 484 IPR029000 -
Lele33g0047 493 SUPERFAMILY Cyclophilin-like 307 478 IPR029000 -
Lele33g0047 493 FunFam Peptidyl-prolyl cis-trans isomerase 298 484 - -
Lele33g0047 493 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 316 474 IPR002130 GO:0000413|GO:0003755
Lele33g0047 493 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 424 436 IPR002130 GO:0000413|GO:0003755
Lele33g0047 493 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 330 345 IPR002130 GO:0000413|GO:0003755
Lele33g0047 493 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 437 452 IPR002130 GO:0000413|GO:0003755
Lele33g0047 493 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 409 424 IPR002130 GO:0000413|GO:0003755
Lele33g0047 493 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 366 378 IPR002130 GO:0000413|GO:0003755
Lele33g0047 493 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 313 477 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0047 Lele-ChrLele33 339038 344246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0047 324 472 U-box Gene Family AT5G67530 41.333 1.22e-22 99.4