Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0044 ATGAATCAGTGCAGAGAAAACTTTTTTACGTTGCGAAGAAAATTCTTGCATAGGCCAAATCCTACGGCAATACTTCCCCTCTGAGCCAAGAAAATCACCAATCAGGCGAATGAAGCTACCCAACGTCCCAACCTTTCTCTTCATGCCTTGCCTAAACTTTCACCGCGAAGATTACAGAAGCCAGTTATATATGTTAACATGGGAAGGTCTCCTTGCTGCGAGAAAGCTCACACTAACAAAGGAGCATGGACCAAGGAAGAAGACGATCGTCTCGTTGCTTATATTCGAGCTCACGGCGAGGGCTGCTGGCGCTCTCTCCCCAAAGCCGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGTCTCCGCTGGATCAACTACCTCCGACCCGACCTCAAACGCGGCAATTTTACCGAAGAAGAAGATGAGCTCATCATCAAGCTCCATGGTCTCCTCGGCAACAAGTGGTCGCTGATAGCCGGGAGACTACCGGGAAGAACGGACAACGAGATAAAGAATTACTGGAATACTCATATAAGAAGGAAGCTTCTGAGCAGAGGAATTGACCCTACAACTCATAGGCCTCTTAACGATGACTCTCAGAACCAATCTCATGCCTCATCTGCTTCTGCTGCTAAACAGCAGGAATCGGAGGTTCTGATTACAGATGAGAATTCCAAACGACCCGGCGTCCTAGAAGTATTCCCCGACTTGAACCTCGAGCTAACCATCAGTCTTCCCCACCACCATCATTAG 753 0.4954 MNQCRENFFTLRRKFLHRPNPTAILPLXAKKITNQANEATQRPNLSLHALPKLSPRRLQKPVIYVNMGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHGLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPTTHRPLNDDSQNQSHASSASAAKQQESEVLITDENSKRPGVLEVFPDLNLELTISLPHHHH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0044 250 SUPERFAMILY Homeodomain-like 79 174 IPR009057 -
Lele33g0044 250 SMART sant 132 180 IPR001005 -
Lele33g0044 250 SMART sant 79 129 IPR001005 -
Lele33g0044 250 Pfam Myb-like DNA-binding domain 133 177 IPR001005 -
Lele33g0044 250 Pfam Myb-like DNA-binding domain 80 127 IPR001005 -
Lele33g0044 250 Gene3D - 80 132 - -
Lele33g0044 250 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 67 214 - -
Lele33g0044 250 CDD SANT 82 127 IPR001005 -
Lele33g0044 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 127 IPR017930 -
Lele33g0044 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 182 IPR017930 -
Lele33g0044 250 CDD SANT 135 178 IPR001005 -
Lele33g0044 250 MobiDBLite consensus disorder prediction 185 222 - -
Lele33g0044 250 Gene3D - 135 218 - -
Lele33g0044 250 ProSiteProfiles Myb-like domain profile. 75 127 IPR001005 -
Lele33g0044 250 MobiDBLite consensus disorder prediction 193 218 - -
Lele33g0044 250 FunFam Myb transcription factor 134 203 - -
Lele33g0044 250 FunFam MYB-related transcription factor 79 132 - -
Lele33g0044 250 ProSiteProfiles Myb-like domain profile. 128 178 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0044 Lele-ChrLele33 323495 327225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0044 67 246 MYB Transcription Factor Family AT4G38620 69.082 1.10e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele33g0044 Myb_DNA-binding 4.7e-14 CL0123