Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0019 ATGGCGATGGAGGATAACGAGAGCCGAGCGAGCGGAGTGCAGGAAACATCGTCGTCTCCCGCTCAAAACCGGCAACAGAGACAGAAACTCGAAGTGTACAATGAGGTTCTTCGTCGCCTCAAGGATTCCAACAACGAAGAGGCGATGCAGCCTGGCTTCCACCATCAGCTCTGGGCTCATTTCAACCGCCTTCCGACACGGTATGCATTGGATGTGAATGTGGAAAGGGCTGCGGATGTTCTGATGCACAAGAGACTACTGCATTTGGCACATGATCCTGCTAATAGGCCTGCGATTGAAGTTCGCCTGGTCCAGGTTCAAGCCATGTCTGACGGAAACTTAGTTGATTCTGTCCATTCAGAAGCACCTGATAATGAAACTGGTCAAATCTCTTCAAAGCACCTAGGGAGACAGAGCATACATCCACCTCCTGCTTTTGGTTCTTCTCCAAACCTTGAAGCCCTGGCACTTGAAGTAACTAAGAGTGAAGATCTAGAGGTGGAACAATCTGTACACGCTGGTGAACAATATTCGAGGCCCATGCATGAAATCACCTTCTCAACAGAAGACAAGCCAAAGCTTCTCAGTCAGTTAACTACTTTGCTTTCTGAGATTGGACTGAATATTCAAGAGGCACATGTTTTTTCCACAACGGATGGTTACTCATTAGATGTGTTTGTTGTCGATGGATGGCCCTATGAGAGGCAGGCGTGGCCAATTCAACAATCAGTATCTTCTGTTGGTGAGCCTGATCAAGGTGTGAAATGTGAACCCGATCATTTGACAATACCTAATGATGGGACTGACGTTTGGGAAATAGATCCTAAACATTTGAAATTTGGAAGTAAAATTGCATCTGGATCATATGGTGATTTATTTAAAGGTACATATTGTAGCCAGGAAGTGGCGATTAAAGTTCTCAAAGCCGAGCATGTAAATTCAGATTTACAGATGGAATTTGCCCAGGAAGTCTACATCATGAGAAAGGTTCGGCATAAGAATGTGGTACAATTTATAGGAGCATGTACCAAGGCCCCATATTTGTGCATAGTAACAGAATTTATGTTCGGCGGAAGTGTGTATGACTACTTACATAAACAAAAGGGTGTATTTAAATTTCCATCCCTGCTCAAAGTAGCAATTGATGTTTCTAAGGGAATGAATTACTTGCACCAAAATAACATCATCCACAGAGACTTGAAGGCTGCGAATCTTTTGATGGATGAAAATTGTGTGGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGCTCAATCTGGAGTTATGACCGCGGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATAGAACACAAGCCATATGATCACAAGGCCGATATATTTAGTTTTGGAGTTGTTTTATGGGAATTGCTAACTGGAAAGCTCCCGTACGAGAATTTGACCCCACTACAGGCAGCTATAGGAGTGGTTCAAAAGGGTCTACGACCCACCATCCCCAAGAATACCCATGCAAAATTTGTTGAGCTTCTTGAGAGATGTTGGCAGCAAGATCCAACACTAAGACCTGATTTCTCTGAAATTATAGACATTCTGCAACAATTGTCTAAAGAGGTTGGAGATGGAGAGGATCCACGCAAGGAAAAATCTGGAGGAATTTTCTCTGTCCTCAGACGAGGTCATCACTGA 1674 0.4391 MAMEDNESRASGVQETSSSPAQNRQQRQKLEVYNEVLRRLKDSNNEEAMQPGFHHQLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRPAIEVRLVQVQAMSDGNLVDSVHSEAPDNETGQISSKHLGRQSIHPPPAFGSSPNLEALALEVTKSEDLEVEQSVHAGEQYSRPMHEITFSTEDKPKLLSQLTTLLSEIGLNIQEAHVFSTTDGYSLDVFVVDGWPYERQAWPIQQSVSSVGEPDQGVKCEPDHLTIPNDGTDVWEIDPKHLKFGSKIASGSYGDLFKGTYCSQEVAIKVLKAEHVNSDLQMEFAQEVYIMRKVRHKNVVQFIGACTKAPYLCIVTEFMFGGSVYDYLHKQKGVFKFPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENCVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVVLWELLTGKLPYENLTPLQAAIGVVQKGLRPTIPKNTHAKFVELLERCWQQDPTLRPDFSEIIDILQQLSKEVGDGEDPRKEKSGGIFSVLRRGHH 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0019 557 MobiDBLite consensus disorder prediction 534 557 - -
Lele33g0019 557 FunFam Serine/threonine-protein kinase isoform 1 268 356 - -
Lele33g0019 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Lele33g0019 557 Gene3D Phosphorylase Kinase; domain 1 268 355 - -
Lele33g0019 557 MobiDBLite consensus disorder prediction 121 149 - -
Lele33g0019 557 PRINTS Tyrosine kinase catalytic domain signature 435 445 IPR001245 GO:0004672|GO:0006468
Lele33g0019 557 PRINTS Tyrosine kinase catalytic domain signature 454 476 IPR001245 GO:0004672|GO:0006468
Lele33g0019 557 PRINTS Tyrosine kinase catalytic domain signature 389 407 IPR001245 GO:0004672|GO:0006468
Lele33g0019 557 PRINTS Tyrosine kinase catalytic domain signature 498 520 IPR001245 GO:0004672|GO:0006468
Lele33g0019 557 PRINTS Tyrosine kinase catalytic domain signature 352 365 IPR001245 GO:0004672|GO:0006468
Lele33g0019 557 MobiDBLite consensus disorder prediction 534 550 - -
Lele33g0019 557 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 133 533 - -
Lele33g0019 557 Pfam Protein tyrosine and serine/threonine kinase 278 526 IPR001245 GO:0004672|GO:0006468
Lele33g0019 557 ProSiteProfiles Protein kinase domain profile. 278 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0019 557 SUPERFAMILY Protein kinase-like (PK-like) 266 527 IPR011009 -
Lele33g0019 557 Coils Coil 23 43 - -
Lele33g0019 557 MobiDBLite consensus disorder prediction 1 29 - -
Lele33g0019 557 SUPERFAMILY ACT-like 181 232 IPR045865 -
Lele33g0019 557 ProSiteProfiles ACT domain profile. 183 259 IPR002912 -
Lele33g0019 557 SMART serkin_6 278 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0019 557 FunFam serine/threonine-protein kinase HT1 357 547 - -
Lele33g0019 557 Gene3D Transferase(Phosphotransferase) domain 1 357 545 - -
Lele33g0019 557 MobiDBLite consensus disorder prediction 121 136 - -
Lele33g0019 557 CDD STKc_MAP3K-like 284 527 - -
Lele33g0019 557 MobiDBLite consensus disorder prediction 9 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0019 Lele-ChrLele33 168005 175137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0019 8 556 MAP Kinase Kinase Kinase AT4G35780 63.908 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele33g0019 PK_Tyr_Ser-Thr 1.2e-73 CL0016