Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0017 ATGGCCATGCGCCATATCAGCACAACACTGAACAGCACACGCGAAAAAGCTGGTCAACATGGCGAGAAAGTGGCAGCTGGGAAGCGTAAGAGGATATCGTACAAAAGAGACGACGACGTGGACACGGGCCATTTCGTAGTTTACAGTATAGATCGTAAGCGATTCCTGGTTCCCCTCAAGTATCTCAAGAGCAACGTCTTCAAGGAGCTGCTCAAATGGTCTGAGGAAGAGTTCGGACTAGCTGACAATGGACTTCTTGTGTTACCTTGTGAACGAGTCGTCTTAGAGTATGTGATCTCGTTGGTAAAAGAAAGAGTGCCAGAAGATTTGGAGAAAGTTTTAATCACTTCATGTCATGGCCTTGCTGCGTCATCTTCTCTTGCTCCAACACAAGCCCACCACCAACAAGCCATGATCCGTGGCCATTAG 429 0.4779 MAMRHISTTLNSTREKAGQHGEKVAAGKRKRISYKRDDDVDTGHFVVYSIDRKRFLVPLKYLKSNVFKELLKWSEEEFGLADNGLLVLPCERVVLEYVISLVKERVPEDLEKVLITSCHGLAASSSLAPTQAHHQQAMIRGH 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0017 142 Pfam Auxin responsive protein 26 101 IPR003676 GO:0009733
Lele33g0017 142 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 22 124 IPR003676 GO:0009733
Lele33g0017 142 MobiDBLite consensus disorder prediction 1 22 - -
Lele33g0017 142 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0017 Lele-ChrLele33 157947 158545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0017 39 106 Calmodulin-binding Proteins AT5G20810 36.232 6.97e-11 55.8