Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0001 ATGAGAGGCAACAGATCGGAGGAAAGCCACCAGATCGGAAAGAAGATGGGAGGCAAAATGAAGATCACGCAGAAGGAAGGAGTAGCGGCGGTAATGCAGAGGGAAAAAGCTGAGAGAACTATACAGAAGAAACACACACGAGGTACTGGTAAATTACAGTTTTCGGTATACCTCCCGGACCCGTGCTCGATTCAAATGGGGATTTGCTGGGGTTCTTCAGCTGACAACTCGAGCACCACCAGCACATCTGATCATCTTAGTGCAGCTACAACAGGAGCATCCCGGACTACCAGCAATACAACTACTGCTACTACATCTTATGGGAGCGGAAGCATCTCCATAAATAGCCAATTTTCCGAGTCCAGTGGTGGTGAAGCTTATACAAATGGGCAGATTTTGCCTACTGCAAATTTAAGGATATTCACCTTTGCGGAATTGAAGGCTGCGACTAAGAATTTTAGAGTTGATACAGTACTTGGAGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAAAAGGCAACGCCAAAAAATGGAAGTGGAACAGTCGTTGCCGTTAAAAAATTGAACTCAGAGAGCTTACAAGGATTTGAGGAATGGCAGTCGGAAATAAATTTTCTGGGACGGCTGTCTCATCCTAACCTCGTTAAGCTGTTAGGGTACTGTTGGGAAGAAAATGAACTTCTTCTCGTCTATGAATTCATGCAAAAGGGCAGTTTGGAGAATCACCTATTTGGAACTAACATTCTTTTGCTTTTGCAAGGGGGTTCTGCTGTTCAACCACTTCCATGGGACATTAGGCTTAAGATTGCAATTGGAGCAGCTCGTGGTTTGGCATTTTTGCACACATCTGAGAAAGTAATTTACCGTGATTTCAAGGCCTCCAATATATTGCTGGATGGGGCTTATACTGCAAAGATTTCAGATTTCGGCTTGGCAAAATTGGCACCTTCAGCTAGTCGGTCCCATGTAACAACAAGGGTGATGGGCACGTTTGGCTATGCGGCTCCTGAGTATGTGGCTACAGGGCATCTGTACGTGAAGAGTGACGTGTATGGATTTGGAGTTGTTTTGGTTGAGATGCTGACGGCCCTTCGGGCACTAGATCAAAACCGCCCCAGCGGCCAACATAATCTTGTGGACTGGGTGAAACCATACTTACAAGATGGAAGAAAATTGAAGGGCATAATGGATTCGCGGTTGGAGGGAAAATATCCATCCAAATCCGCATTTCGTATAGCTCAACTTGCTTTAAAATGTCTTGCGTTAGAGCCTAAAAATCGGCCCTCAATGAAGGAAGTTCTGGAGAACTTGGAGCGGATTCAAACTGCCAATGACAGGCCTGTGGAGCCTAGGCCCCGTTCTACTCGTAACGTGGCTCCTCATCATGTTTCCCGACCTCTGCGCCCTCGATCTCACTGA 1428 0.4615 MRGNRSEESHQIGKKMGGKMKITQKEGVAAVMQREKAERTIQKKHTRGTGKLQFSVYLPDPCSIQMGICWGSSADNSSTTSTSDHLSAATTGASRTTSNTTTATTSYGSGSISINSQFSESSGGEAYTNGQILPTANLRIFTFAELKAATKNFRVDTVLGEGGFGKVFKGWLEEKATPKNGSGTVVAVKKLNSESLQGFEEWQSEINFLGRLSHPNLVKLLGYCWEENELLLVYEFMQKGSLENHLFGTNILLLLQGGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGAYTAKISDFGLAKLAPSASRSHVTTRVMGTFGYAAPEYVATGHLYVKSDVYGFGVVLVEMLTALRALDQNRPSGQHNLVDWVKPYLQDGRKLKGIMDSRLEGKYPSKSAFRIAQLALKCLALEPKNRPSMKEVLENLERIQTANDRPVEPRPRSTRNVAPHHVSRPLRPRSH 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0001 475 SUPERFAMILY Protein kinase-like (PK-like) 133 442 IPR011009 -
Lele33g0001 475 ProSitePatterns Protein kinases ATP-binding region signature. 159 190 IPR017441 GO:0005524
Lele33g0001 475 CDD STKc_IRAK 159 443 - -
Lele33g0001 475 ProSiteProfiles Protein kinase domain profile. 153 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0001 475 Gene3D Transferase(Phosphotransferase) domain 1 237 459 - -
Lele33g0001 475 PANTHER OS01G0588500 PROTEIN-RELATED 91 444 - -
Lele33g0001 475 MobiDBLite consensus disorder prediction 444 475 - -
Lele33g0001 475 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 237 452 - -
Lele33g0001 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Lele33g0001 475 Pfam Protein tyrosine and serine/threonine kinase 155 440 IPR001245 GO:0004672|GO:0006468
Lele33g0001 475 MobiDBLite consensus disorder prediction 79 106 - -
Lele33g0001 475 MobiDBLite consensus disorder prediction 444 459 - -
Lele33g0001 475 FunFam Serine/threonine-protein kinase BIK1 120 236 - -
Lele33g0001 475 Gene3D Phosphorylase Kinase; domain 1 137 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0001 Lele-ChrLele33 2581 7350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0001 130 444 Receptor kinase-like Gene Family AT4G02010 50.157 1.95e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele33g0001 PK_Tyr_Ser-Thr 4.5e-47 CL0016