Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1355 ATGAGCAATATAAGCATGGTGGAGGCGAAGTTGCCGCCAGGTTTCAGGTTCCATCCCAGAGATGAAGAACTTGTGTGCGATTACTTGATGAAGAAAGTCACACACTGTGTTAATTCCGATTCCACTCTCATGATCGACGTTGACCTCAACAAGTGTGAGCCTTGGGATATTCCAGAAAGGGCATGTGTGGGAGGGAAGGAGTGGTACTTCTACACGCAGAGAGACAGGAAGTACGCGACGGGGGTGAGAACGAATAGAGCGACGGCGTCCGGATACTGGAAGGCCACCGGGAAGGACAGGGCTGTGCTTAGGAAGGCCAAAGTGGTTGGCATGAGAAAGACTTTGGTGTTCTATCAAGGGAGGGCTCCTAAAGGCAAAAAGACTGACTGGGTCATGCATGAGTTTCGCCTTCATTCTTCCCTCCCTCATCTCTCTCATCATTCTTTCCCCCAGGAAGACTGGGTGCTGTGTAGGGTATTCTACAAGAACAGAGAAGAAGAAAGTGGAAAAGCTGACATGGGAAGCTGCTATGACGACACTGGCTCTTCATCTCTTCCTGAATTAATGGATTCTTACATCAGTTTTGATCATCCTTCTTCTGCAGCTCATAACCACCATTATCAATATGAGCAAGTGCCCTGCTTCTCCAATAATAATGCTTTATTATTCCCTCCTCCTCCAACAAACCCTAATGCTAAACCTAGCAGCAATAATTACAACCACCATGATCACACCAACTTATTGGGTCCACCAAATGGAGTAGCAGCCGCAGGATCATTTCCTCATGACTCCAAGGTTCTCAATGCTCTGTTGACACAACTCACCAAGATGGAAACTCATGAAGGATCTCCTTACTTATCTCAAGCGGCAATTCCCAATTATTTATGGAATAATCCCTGA 900 0.4656 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHCVNSDSTLMIDVDLNKCEPWDIPERACVGGKEWYFYTQRDRKYATGVRTNRATASGYWKATGKDRAVLRKAKVVGMRKTLVFYQGRAPKGKKTDWVMHEFRLHSSLPHLSHHSFPQEDWVLCRVFYKNREEESGKADMGSCYDDTGSSSLPELMDSYISFDHPSSAAHNHHYQYEQVPCFSNNNALLFPPPPTNPNAKPSSNNYNHHDHTNLLGPPNGVAAAGSFPHDSKVLNALLTQLTKMETHEGSPYLSQAAIPNYLWNNP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1355 299 MobiDBLite consensus disorder prediction 225 256 - -
Lele32g1355 299 ProSiteProfiles NAC domain profile. 11 162 IPR003441 GO:0003677|GO:0006355
Lele32g1355 299 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Lele32g1355 299 FunFam NAC domain-containing protein 100-like 20 166 - -
Lele32g1355 299 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 219 - -
Lele32g1355 299 SUPERFAMILY NAC domain 2 163 IPR036093 GO:0003677|GO:0006355
Lele32g1355 299 Gene3D NAC domain 20 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1355 Lele-ChrLele32 14511966 14514678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1355 2 297 NAC Transcription Factor Family AT1G56010 55.385 8.39e-113 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele32g1355 NAM 1.1e-37 No_clan