Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1348 ATGGACACAAACACTTCACACAAGTCAAAATCCCATATCCAGAGCAGTGCAGTAACCAGGCCTTCCATTAATCTCAGCATGATGCGCAATTCTCGACTAAGTTACACTAGCATGTTCGACTTTCAGATTGGAACAGGTTCCAAGGTGGAGCTGCCTTTCTTGATTGCTCGAGAGCTACAATTGAGACAAGTAGTATCGATCAGCATTCCCTCTTGTTTTGACCAAAAAACTAGGCTAGAGATTCAGGCTGATTGTGCCAGTGTGGATCTGAGGTCTCGGTGTCCATTCTTTTATGAATTTGGATGCAAGATAGCACCCGTGTACAAGGAACTCCTGACCAAGGCACATACTGCAGCATTTTCAGCTCCTACCAAGTGTATGAGGCAGCTCAATCCTCCATGGCATCCTTTAAGAAGTGGCGAATTGGGGGACCTAGATTTCAGAAGGCCCCTGTTTTTGGAAGAAAGAAAATCAACCGAATAG 483 0.4513 MDTNTSHKSKSHIQSSAVTRPSINLSMMRNSRLSYTSMFDFQIGTGSKVELPFLIARELQLRQVVSISIPSCFDQKTRLEIQADCASVDLRSRCPFFYEFGCKIAPVYKELLTKAHTAAFSAPTKCMRQLNPPWHPLRSGELGDLDFRRPLFLEERKSTE 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1348 160 CDD GINS_A_psf3 65 130 - -
Lele32g1348 160 Gene3D - 18 131 IPR038437 -
Lele32g1348 160 SUPERFAMILY GINS helical bundle-like 69 114 IPR036224 -
Lele32g1348 160 PANTHER UNCHARACTERIZED 42 108 IPR010492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1348 Lele-ChrLele32 14468470 14471733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1348 46 127 Core DNA Replication Machinery Family AT3G55490 57.576 1.12e-33 115