Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1343 ATGATTAACTTAGTTTTTAGGCTTCTAGAACTCGATGATCTTGAGTTTAGATGGGTAATTCGAGTGAAGTTCACAGCTGAAGAGCTCCGTTGCATTATGGACTTTAAGCATAATATTCGTAATATGTCTGTTATTCCACATGTTGATCATGGAAAATCTACCCTCACTGGCTCTCTTGTGGCGGCTGCTGGCATTATTGCACAAGAAGTGGCAGGTGATGTTCGGACGAGTGATACCCGTCAGGATGAAGCAGAGCGCGGTATCACAATCAAGTCCACTGGTATTTCTCTCTACTACGAAATGACTGATGAGGCTCTCAAGAGCTTCAAAGCTGCACTTCGTATAACTGATGGAGCTCTAGTGGTGGTAGATTGTATTGAATGTGTTTGTGTCCAAACTGAAACTGTGCTTCGACAGGCACTTGGAGAAAGAATTAGGCCTGCTTTGACTGTGAATAAAATGGACAGGTGCTTCCTTGAGCTCCAGGTGGATGGAGAGGAGGCTTACCAGACCTTTCAAAGGGTTATTGAGAATGCCAATGTGACCATGGCTACATATGAAGATCCCCTCCTTGGTGATTGTCAGGTTTACCCAGAGAAAGGAACTGTTGCTTTTTCTGCTGGTTTGTATGGGTGGGCTTTCACCTTGACCAACTTCGCTAAAATGTATGCCTCTAAATTTGGAGTTGACGAGTTAAAGATGATGGAAAGGCTGTGGGGTGAGAACTTCTTTGATCCAGCAACCAAGAAATGGACCAGCAAGATCAGTGGTTCGCCTACCTGCAAGCGTGGGTTTGTTCAGTTCTGCTATGAGCCTATCAAGCAGATAATTTCCACTTGTATGAATGATGAAAAGGATAAGTTGTGGCCTATGTTGCAAAAGCTTGGGGTCACCATGAAATCTGAAGAGAAGGACCTAATGGGTAAAAGCATTGATGAAACGAATTGTGATCCTGATGGACCCCTGATGCTTTATGTCTCAAAAATGATTCCTGCATCTGATAAGGGCAGGTTTTTGGCTTTTGGCCGTGTCTTCTCTGGTAAGGTCTCCACTGGTTTGAAGGTTAGAATCATGGGACCAAACTATGTCCCTGGGGAGAAGAAAGACATGTACGTTAAGAATGTGCAAAGAACTGTCATCTGGATGGGAAAGAAGCAAGAAACTGTTGAGGATGCGCCTTGTGGTAACACAGTTGCTATGGTTGGTCTGGATTAA 1215 0.4403 MINLVFRLLELDDLEFRWVIRVKFTAEELRCIMDFKHNIRNMSVIPHVDHGKSTLTGSLVAAAGIIAQEVAGDVRTSDTRQDEAERGITIKSTGISLYYEMTDEALKSFKAALRITDGALVVVDCIECVCVQTETVLRQALGERIRPALTVNKMDRCFLELQVDGEEAYQTFQRVIENANVTMATYEDPLLGDCQVYPEKGTVAFSAGLYGWAFTLTNFAKMYASKFGVDELKMMERLWGENFFDPATKKWTSKISGSPTCKRGFVQFCYEPIKQIISTCMNDEKDKLWPMLQKLGVTMKSEEKDLMGKSIDETNCDPDGPLMLYVSKMIPASDKGRFLAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDMYVKNVQRTVIWMGKKQETVEDAPCGNTVAMVGLD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1343 404 FunFam Translation elongation factor 2 295 404 - -
Lele32g1343 404 Gene3D - 23 231 IPR027417 -
Lele32g1343 404 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 78 93 IPR031157 -
Lele32g1343 404 PRINTS GTP-binding elongation factor signature 111 122 IPR000795 GO:0003924|GO:0005525
Lele32g1343 404 PRINTS GTP-binding elongation factor signature 147 156 IPR000795 GO:0003924|GO:0005525
Lele32g1343 404 PRINTS GTP-binding elongation factor signature 41 54 IPR000795 GO:0003924|GO:0005525
Lele32g1343 404 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 28 310 - -
Lele32g1343 404 Gene3D Translation factors 292 404 - -
Lele32g1343 404 CDD EF2_II 321 404 - -
Lele32g1343 404 Pfam Elongation factor Tu domain 2 338 404 IPR004161 GO:0005525
Lele32g1343 404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 309 IPR027417 -
Lele32g1343 404 SUPERFAMILY Translation proteins 312 404 IPR009000 -
Lele32g1343 404 Pfam Elongation factor Tu GTP binding domain 37 221 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1343 Lele-ChrLele32 14439920 14442269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1343 22 404 Eukaryotic Initiation Factors Gene Family AT1G56070 73.961 0.0 677