Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1342 ATGGATCATATATTGGAAGATTTGAGAAGCACAGAGGAGTTTGACGAACTTCCAGGGTTTCGATTCCATCCAACAGATGAAGAACTCGTGAGATTCTACCTCAGAAGGAAGCTTGACAATAAACCCATCAGCATCGAACTCATCAAGCAGATTGATATTTACAAATACGACCCTTGGGATCTTCCGAAAGCTAGTTGTATGGGAGGAGAGAAGGAGTGTTACTTCTACTGCAGAAGGGGAAGGAAGTACAAGAACAGCATAAGGCCGAATAGAGTGACAGGATCAGGGTTCTGGAAAGCAACAGGCATAGACAAGCCTGTCTATTCTCTTGCAGGAGACTGCATTGGCCTCAAGAAAACCCTCGTTTACTATCGTGGCAGCGCCGGCAAAGGCACCAAAACTGACTGGATGATGCATGAGTTTCGCCTCCCCTCCAACAACATCAATAATCCCCAAGAAGCTGAAATTTGGACAGTGTGTAAAATTTTCAAAAGAAATGTGACGCAAAGAAAGTGCACACCAGATTGGAGGCAGTTAGCTGCAAAGCGACGTCGTTGCAGTGACAATGAGAAGAGCAGATCAATGAGCATTAATAATGGTACTGTGGAGTCTTGTAATAGTACTGTTACTTATGATCAAGAAGCATATATCAACTTCGGAGGCAGCCCAGATCATCATAAGCAAAAGCCTCTTGTTCATAACTATAGTACGATGAGCAATAATCGTTATAATGACCAAAGGAATCATCAATATGTGAGCCAGCACTTCAGCACTTCAATGATGGCACAGCAGCCTCATCATCAATTAACTCCGTCGTCATCACCATCACCATCGTCAGCTTTGAGCTTCTGGGCTAATAACCAGCAGCAGGCTTCCAATAACGATGACCTGTTTGCGTTAGAGAACTCATGGGATGAGCTTGAATCAGTCGTGCAGTTTTGCTCTTGA 948 0.4399 MDHILEDLRSTEEFDELPGFRFHPTDEELVRFYLRRKLDNKPISIELIKQIDIYKYDPWDLPKASCMGGEKECYFYCRRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSLAGDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNNINNPQEAEIWTVCKIFKRNVTQRKCTPDWRQLAAKRRRCSDNEKSRSMSINNGTVESCNSTVTYDQEAYINFGGSPDHHKQKPLVHNYSTMSNNRYNDQRNHQYVSQHFSTSMMAQQPHHQLTPSSSPSPSSALSFWANNQQQASNNDDLFALENSWDELESVVQFCS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1342 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 267 - -
Lele32g1342 315 SUPERFAMILY NAC domain 12 165 IPR036093 GO:0003677|GO:0006355
Lele32g1342 315 FunFam NAC domain-containing protein 35 25 168 - -
Lele32g1342 315 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Lele32g1342 315 ProSiteProfiles NAC domain profile. 16 165 IPR003441 GO:0003677|GO:0006355
Lele32g1342 315 MobiDBLite consensus disorder prediction 259 281 - -
Lele32g1342 315 Gene3D NAC domain 25 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1342 Lele-ChrLele32 14433593 14435330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1342 6 176 NAC Transcription Factor Family AT5G39820 56.281 5.10e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele32g1342 NAM 7.3e-34 No_clan