Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1341 ATGGCTGCTTTTCCTCAATTCTATTCAAACTACACAATTTTCCCCACTGATTTCCCTGAGTTTCAAACCCAAGCTTCAGCCATTAATGGCAACGTTAATAATTTCTCAGTTATGGAGAATAGAATGTGTGGCCACTACGATAGCTTCATCAACAACCATATTCCCAATAATGGTGCAGCACTAGATCATGTTTCTTCAGTATTGGAATGTGATACTATGTCTTCGTCTTGGTTTCCTGCGTTTTCTGATCAGCTAGCAGGGAGCTTATCAGACTTGGCCATTCCGGTGATTTATGGCGGCGGCGCTGATGGCGGTTTCCAGAGTTTGAATGGTGGCGGATACAAACCATCGCACCATCTGATGGGTGACTTTGGTGAAGAATGTTGCGGGTTTGTGGATGATATTATTAAGCCACCTTCTTATCCAAATTCTGCCGCAGAAAAGTGGGGATCATATCAAGGAAATCAAATGGCAGCAGTTGAGGAACCAAACATAAAGTTAGGACGATACACAGAAGCAGAAAGGAAGGAGAGAATTCTCCGATATTTGAAGAAAAGAAACCAAAGAAACTTCAACAAAACCATCAAGTATGCTTGTCGGAAAACTCTAGCTGATCGGAGAGTCAGAGTTAGAGGAAGGTTTGCCAGAAACAACGACCTCTGTGAGGATGAAATCGCCATGAAGAAGAATGAGAATATTAGTCGCAAGAAGGACCTCTACGGTGGTGATTCCATCCAATTTCAGATAAAGAACGATGATGATGAGGACGATTGGTTGCAAGAGGCAATGGCAAGTTTTGTGTATCTGTCTCATTCTTCGCCTGAAGATATGTATAGAGCATCGATCGATGAAGAAAGATTGAGAAAAAGCTGA 873 0.4227 MAAFPQFYSNYTIFPTDFPEFQTQASAINGNVNNFSVMENRMCGHYDSFINNHIPNNGAALDHVSSVLECDTMSSSWFPAFSDQLAGSLSDLAIPVIYGGGADGGFQSLNGGGYKPSHHLMGDFGEECCGFVDDIIKPPSYPNSAAEKWGSYQGNQMAAVEEPNIKLGRYTEAERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNDLCEDEIAMKKNENISRKKDLYGGDSIQFQIKNDDDEDDWLQEAMASFVYLSHSSPEDMYRASIDEERLRKS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1341 290 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 132 233 IPR045281 GO:0009909
Lele32g1341 290 Pfam CCT motif 175 217 IPR010402 GO:0005515
Lele32g1341 290 ProSiteProfiles CCT domain profile. 175 217 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1341 Lele-ChrLele32 14405210 14406607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1341 130 222 C2C2-CO-like Transcription Factor Family AT5G24930 39.785 1.36e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele32g1341 CCT 9.2e-17 CL0281