Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1335 ATGGCCTTTGCGATTGTTTCTGCTGTTTGTGTGTTCTTCAGCTGCTTGGTTTCTGTATCACAGGCTCAAAACGCTACCACAGATCCTTCTGAAGCGAGAGCTTTGAATTCAATCTTCAACAAATGGGAAATATCGGCACAAGCAAATGTATGGAATATAAGCGGTGAACTATGCAGTGGACGAGCCATTGACAGCTCTACCGTGATCGATGCCCCTGCGTACAATCCATTTATCAAATGCGAGTGCTCCAATGACACTTGCCACATTACTGCATTGAAGGTTTATGCAGTGGATGTTGTTGGGGAAATCCCAGAAGAACTATGGACTCTGACTCGACTCACCAATTTGAACCTCGGCCAGAATTACTTGACGGGTTCTCTACCTCCAGCCGTTGGAAATCTGACTAGTATGCAGTACATGAGCTTAGGCATCAATTCCTTATCAGGGGAGCTTCCCAAGGAATTGGGAAATCTTACCGAGTTAATAATATTGGGTCTTGGATCCAACAAATTCAATGGTTCTATCCCATCTGAACTAGGGAAACTTACGAAATTGCAAGAATTCTATTTAGATAGTTCGGGACTTAGCGGCCAGATTCCTCCCACTTTTGCTAATCTTAAAAGCCTGCAGAAACTATGGGCTTCAGACATGGAACTCACAGGCAGGATACCTGACTTCATAGGAAATTGGTCTAAGCTTATAGACTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATACCATCATCATTTAGCAATCTGACTTCCCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGGGCTCCTCACTGGAATTTATAAGGAATATGAAGTCTTTGACTGTCTTAGTACTGAGAAATAACAATATTTCTGATTCAATTCCATCCAATATTGGTGAATTTCTAAATTTGACCCAGCTGGATCTGAGCTTCAATAACATCACAGGACAGATTCCGGGATCACTTTTCAATCTGAGTTCACTAACACACTTGTTTCTTGGAAATAACAAACTCAGTGGTATAATCCCTACTCAGATAGGCACAACTCTTTCTAATATAGATTTGTCCTACAACAATCTATCCGGGAGCCTCCCCTCTTGGGTAAACCAACAAAATTTGCAACTAAATTTGGTTGCGAACAACCTGATAATAGAAAGCTCAAATAGCAGTGGCCTTCCTTCTGGACTCAATTGTTTGCAGCAAAATTTTCCTTGTTTTCATGGTGCCGGGAGATATTATAACTTCGCAATCAAGTGTGGCGGTCCTCAAATTACATCATCAGAAAGCATTACTTATGAAAGAGATAATGAGACACTTGGTCCTGCAACTTATTTTGTTACTGATACAACAAGATGGGCGGTTAGCAATGTTGGGTTATTTACCGGGACAAACAATGCTCTGTACACAAGTTTTGTATCCAATCAGTTCACTGGTACTGTGGACACAGAGCTGTTCCAGACAGCCCGGCTATCGGCTTCTTCATTAAGATATTATGGCTTAGGGCTGGAAAATGGGAATTATAACGTTTCCCTCTATTTCGCGGAAACATCTGTTCAAGATACTACTACATGGAAAAGTCTCGGAAGACGGGTCTTTGATATATATATCCAGGGGGATCGCGTTTGGAAGGATTTTGACATAAAAAAGGAAGCTGGGGGTGCCTCTTTCAGAGCTGTCCGAAGGGATTTTCAGGTTAATGTGTCAGAAAACGTTCTTGAGATCCATCTGTTTTGGGCTGGAAAAGGGACTTGCTGCATACCATCTCAAGGTACTTACGGTCCTCTGATTTCAGCAATCAGCGCTATCCCAGTCAGTAACAAACCTCCAGGCAGTGCAAAGAACAGAACTGGTCTGATTGTGGGACTTGTTGTCGGTGTTGGAGTTGTAAGCTTTCTGTCTGTTCTAGTTGTTTTCTGTATCATCCAGAGAAGAAAGCGTCTTGGAGATGGTGAAGAAGAGCTTTTAGGTATTGATACAAAGCCATACACTTTCAGCTATTCTGAGTTAAAGAATGCTACAGATGACTTCAATCCTGGCAACAAACTGGGAGAGGGAGGTTTCGGACCTGTTTTTAAGGGAACGCTTAATGATGGAAGAGTAATTGCTGTGAAACAACTATCTGTAGGATCTCATCAAGGAAAGAGCCAATTCATCGCTGAGATTGCAACTATATCTGCTGTGCAACATCGCAATCTTGTTAAATTATACGGATGTTGCCTTGAAGGAACTAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCACTATTTGGAAATGGTTTAAGTCTCAACTGGGCCACACGCTATGAGATCTGCATGGGTGTAGCTAGAGGTTTAGCTTATCTTCACGAAGAGTCTCGTCTCCGTATTGTGCACCGTGATGTAAAGGCTAGTAATATTCTGCTTGATCATGAGCTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAGTTATACGATGATAAGAAGACCCATATAAGCACCCGTGTGGCTGGGACAATTGGATACCTTGCTCCGGAGTATGCCATGCGTGGGCACCTTACAGAGAAAGCAGATGTGTTTTCCTTTGGGGTTTTGGCCCTAGAGATGGTTAGTGGGAGGCCAAATACTGATTCAACCCTGGAAGGGGAGAAGATGTATCTTCTAGAATGGGCTTGGCAGCTGCATGAAAACAACCGTATACTTGGACTGGTAGATCCTAGACTATCAACAGGTTTCAACGAGGAAGAAGTAAACAGGATTGTAGGGATATCTCTTCAGTGCACTCAATCCTCACCGTCATTAAGGCCGGCGATGTCCCGTGTGGTAGCAATGCTTTCTGGAGATATCGAAGTGAGCGCTGTAGCTTCAAAGCCGGGATACTTAACAGACTGGAAATTTGATGATGTGAGCAGCTTCATAAGTGGGTTGGCCACAAAGGGATCAGGTACAAGTCAATATAACTCATCCACAAGTACCAGCTCATTCAATGTTGAAAGCCAATCACCTGGAGATGCTTCTAAGCCCATCCTTCGTCACATTATTAGTGAAGGTAGGTAG 3057 0.4262 MAFAIVSAVCVFFSCLVSVSQAQNATTDPSEARALNSIFNKWEISAQANVWNISGELCSGRAIDSSTVIDAPAYNPFIKCECSNDTCHITALKVYAVDVVGEIPEELWTLTRLTNLNLGQNYLTGSLPPAVGNLTSMQYMSLGINSLSGELPKELGNLTELIILGLGSNKFNGSIPSELGKLTKLQEFYLDSSGLSGQIPPTFANLKSLQKLWASDMELTGRIPDFIGNWSKLIDLRFQGNSFEGPIPSSFSNLTSLTELRISEISNGGSSLEFIRNMKSLTVLVLRNNNISDSIPSNIGEFLNLTQLDLSFNNITGQIPGSLFNLSSLTHLFLGNNKLSGIIPTQIGTTLSNIDLSYNNLSGSLPSWVNQQNLQLNLVANNLIIESSNSSGLPSGLNCLQQNFPCFHGAGRYYNFAIKCGGPQITSSESITYERDNETLGPATYFVTDTTRWAVSNVGLFTGTNNALYTSFVSNQFTGTVDTELFQTARLSASSLRYYGLGLENGNYNVSLYFAETSVQDTTTWKSLGRRVFDIYIQGDRVWKDFDIKKEAGGASFRAVRRDFQVNVSENVLEIHLFWAGKGTCCIPSQGTYGPLISAISAIPVSNKPPGSAKNRTGLIVGLVVGVGVVSFLSVLVVFCIIQRRKRLGDGEEELLGIDTKPYTFSYSELKNATDDFNPGNKLGEGGFGPVFKGTLNDGRVIAVKQLSVGSHQGKSQFIAEIATISAVQHRNLVKLYGCCLEGTKRLLVYEYLENKSLDQALFGNGLSLNWATRYEICMGVARGLAYLHEESRLRIVHRDVKASNILLDHELTPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEMVSGRPNTDSTLEGEKMYLLEWAWQLHENNRILGLVDPRLSTGFNEEEVNRIVGISLQCTQSSPSLRPAMSRVVAMLSGDIEVSAVASKPGYLTDWKFDDVSSFISGLATKGSGTSQYNSSTSTSSFNVESQSPGDASKPILRHIISEGR 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1335 1018 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 978 - -
Lele32g1335 1018 Pfam Malectin domain 415 600 IPR021720 -
Lele32g1335 1018 FunFam Leucine-rich repeat receptor-like protein kinase 647 752 - -
Lele32g1335 1018 FunFam Putative LRR receptor-like serine/threonine-protein kinase 268 391 - -
Lele32g1335 1018 ProSiteProfiles Leucine-rich repeat profile. 304 326 IPR001611 GO:0005515
Lele32g1335 1018 ProSiteProfiles Protein kinase domain profile. 677 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1335 1018 Gene3D Transferase(Phosphotransferase) domain 1 753 956 - -
Lele32g1335 1018 Pfam Protein tyrosine and serine/threonine kinase 680 945 IPR001245 GO:0004672|GO:0006468
Lele32g1335 1018 Gene3D Ribonuclease Inhibitor 270 393 IPR032675 -
Lele32g1335 1018 MobiDBLite consensus disorder prediction 980 1007 - -
Lele32g1335 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Lele32g1335 1018 SUPERFAMILY L domain-like 84 388 - -
Lele32g1335 1018 Gene3D Ribonuclease Inhibitor 28 269 IPR032675 -
Lele32g1335 1018 Pfam Leucine rich repeat 280 339 IPR001611 GO:0005515
Lele32g1335 1018 CDD STKc_IRAK 683 945 - -
Lele32g1335 1018 FunFam Putative LRR receptor-like serine/threonine-protein kinase 753 957 - -
Lele32g1335 1018 Gene3D Phosphorylase Kinase; domain 1 652 752 - -
Lele32g1335 1018 FunFam Leucine-rich repeat transmembrane protein kinase 29 267 - -
Lele32g1335 1018 MobiDBLite consensus disorder prediction 980 1003 - -
Lele32g1335 1018 FunFam Leucine-rich repeat receptor-like protein kinase 413 604 - -
Lele32g1335 1018 SMART LRR_typ_2 326 350 IPR003591 -
Lele32g1335 1018 SMART LRR_typ_2 110 134 IPR003591 -
Lele32g1335 1018 SMART LRR_typ_2 278 302 IPR003591 -
Lele32g1335 1018 SMART LRR_typ_2 158 182 IPR003591 -
Lele32g1335 1018 SMART serkin_6 677 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1335 1018 Gene3D - 413 604 - -
Lele32g1335 1018 SUPERFAMILY Protein kinase-like (PK-like) 660 961 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1335 Lele-ChrLele32 14356967 14367967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1335 94 267 Receptor kinase-like Gene Family AT1G56120 28.736 3.12e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele32g1335 PK_Tyr_Ser-Thr 1.3e-47 CL0016