Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1327 ATGACCTTCCCACTCATGCAACTCCTTTTAGTTTGGAAGGGTCCGAAGTACAAGAAGCTTATCCTTTTCGCTCCTCTTCCTCCGTTCCGTTCTCGGTTTCCAACAAATAAAGGGCAGTGTAGTAGAAAAGTACTACACGGGTCAACCTTTGAGGAGTCTGACAATGGGCCAGATTCAAGTCTTTTGTGCAGGGAGCTCAAATGGTTATTGGAAGATGCTGTTGAAGATCACACTGTATTTTCCCAAATGGGTGTTCAAAATGATAGGAGAGTAACAATGAGGGCAGAGGTAGATGAGCTTTACAATCTATGGAAGCAGAGAATCCATGAGAAGAGACCTTTTCAATACATAGTTGGATGTGAGCATTGGAGGGATTTGGTGTTGAGCGTCCAAGAGAGTGTCTCGATTCTTAGACCCGAGACAGAACATATTATTGATTTGGTGTCCAATGTGGTCTCAAAAGATGATGAATTGAAGGAAGGTGTTTGGGCAGATTTGGGGACAGGAAGTGGTGCTCTTGCCCCATTGGAATCGGAAATTATTGAAATAAGGGAGGGATCATGGTTTGAATCAGTGAAGGATGTAGAAGGAAAGCTTTCGGTTGGAAAACATGAACCAAGAGTTGCATTAGATGGCGGTGTTAATGGCATGGATGCTCTTCTCCATCTCTGTGATGGGGCTGCTTTGTTCTTGAAACCTGGTGGATTTTTTGCCTTTGAGGATGGAAAATCTTCAGAAAGAGTTGTCAGCCATGCTCATCTGGTCAAGAAGACAGAAGCTCATGGATATGAAGATTCTTCCTATGTTGCTTCTAACTGTCTTTTTCATAACTTACCTTTACAGACAAATGGTGAGCAGCAATGCAGGGCTCTTGTTGGTTATATGGAAAATTATAAAAGCATAAGCTTATGCAACTTTGCAGTTGTTCCTGATTTTGCTGTTTTGGGCTTTAGCAGCGGAAAACGGGGGCTTATCGCCTTATCCCCAGACCTCAGTCCTCACAGTCACTCTAGGTCGCTAATTCAATCGTCGTCGTTCCTTGATCACAAGCCTCAAACTTCAATCCTTTTCTTCAATGTAAGTCTCCTGTACTTCATTAAACTTTATCTGGATTTTCTTTTCCTTTTTCTGTATATATTATATTTCTCAGCCTGTCTTCTCTTGTGCTTCTTTGGGTTGTTCCATTCTGCGGGTCTTTCATCTTCTGGGCCCTCATAAGAGGCCATTTTTGTTTGGTTGGGCTCCTTGTGTTCTATGGCTTCTTCAATACAACCCGTTTCCACGGATGAGCCTGTTGTTACTGCAGCTTGGCTTCATGCTAACCTTAAGGACCCTGACTTGAAGGTACTGGATGCATCCTGGTACATGCCAGATGAGCAGAGAAACCCCTTTCAAGAATATCAGGCTGCACGCATTCCTGGAGCCCTTTTCTTTGACTTAGACAGAATAGCAGATCTAACTACAGATTTGCCTCATATGTTGCCATCAGAGGAAGCTTTTGCTGCTGCTGTGTCTGCTTTCCACATAGCAAACGAAGAAAGGGTGGTTGTTTATGATGGCAAAGGAATATTTAGTGCACCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACAAAGTTTGGGTATTAGATGGTGGACTGCCAAAATGGCGTGCATCAGGATATGACATCGAAACTAGTGCTTCTAGTGATGCTATATTAAAATCCAGTGCTGCCGCCGAGGTAGTAGAGAAAGTATATCGGGGACAGTCAGTTGGCCCAATCACATTTCAAACTAAACTTCAGCCGCATCTTGTTTGGTCCATGGAACAGGTAAAGAGAAACATTGGGGGAAAAAGCTACCAGCACATAGATGCACGATCAAAGCCTAGGTTTGATGGAGCAGCACCTGAACCCCGAAAAGGTATCCAAAGTGGTCATATACCTGGAAGCAAGTGCATTCCTTTCTTCCAGTTGTTGGATGCTTCACAGACACTGTTACCAGCTGATGAAATTAAGAAGCGAGTTGATCAAGAAGGTATCTCTTTGGATGGCCCCATCATGGCTTCATGTGGCACCGGCGTAACTGCTTGCATTCTCGTATTGGGCCTCCACCGTCTTGGGAAGTCTGACATTGCAGTCTACGATGGGTCTTGGACCGAATGGGCATTACAATCTGATACGGCTAAAGAAACTTCATGA 2184 0.4409 MTFPLMQLLLVWKGPKYKKLILFAPLPPFRSRFPTNKGQCSRKVLHGSTFEESDNGPDSSLLCRELKWLLEDAVEDHTVFSQMGVQNDRRVTMRAEVDELYNLWKQRIHEKRPFQYIVGCEHWRDLVLSVQESVSILRPETEHIIDLVSNVVSKDDELKEGVWADLGTGSGALAPLESEIIEIREGSWFESVKDVEGKLSVGKHEPRVALDGGVNGMDALLHLCDGAALFLKPGGFFAFEDGKSSERVVSHAHLVKKTEAHGYEDSSYVASNCLFHNLPLQTNGEQQCRALVGYMENYKSISLCNFAVVPDFAVLGFSSGKRGLIALSPDLSPHSHSRSLIQSSSFLDHKPQTSILFFNVSLLYFIKLYLDFLFLFLYILYFSACLLLCFFGLFHSAGLSSSGPSXEAIFVWLGSLCSMASSIQPVSTDEPVVTAAWLHANLKDPDLKVLDASWYMPDEQRNPFQEYQAARIPGALFFDLDRIADLTTDLPHMLPSEEAFAAAVSAFHIANEERVVVYDGKGIFSAPRVWWMFRVFGHDKVWVLDGGLPKWRASGYDIETSASSDAILKSSAAAEVVEKVYRGQSVGPITFQTKLQPHLVWSMEQVKRNIGGKSYQHIDARSKPRFDGAAPEPRKGIQSGHIPGSKCIPFFQLLDASQTLLPADEIKKRVDQEGISLDGPIMASCGTGVTACILVLGLHRLGKSDIAVYDGSWTEWALQSDTAKETS 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1327 727 ProSiteProfiles Rhodanese domain profile. 611 725 IPR001763 -
Lele32g1327 727 CDD TST_Repeat_1 432 555 - -
Lele32g1327 727 ProSiteProfiles Rhodanese domain profile. 443 560 IPR001763 -
Lele32g1327 727 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 92 265 IPR029063 -
Lele32g1327 727 SMART rhod_4 601 722 IPR001763 -
Lele32g1327 727 SMART rhod_4 433 557 IPR001763 -
Lele32g1327 727 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 430 562 IPR036873 -
Lele32g1327 727 FunFam Sulfurtransferase 596 727 - -
Lele32g1327 727 CDD TST_Repeat_2 602 717 - -
Lele32g1327 727 Gene3D - 426 567 IPR036873 -
Lele32g1327 727 PANTHER THIOSULFATE SULFERTANSFERASE 429 726 IPR045078 GO:0016783
Lele32g1327 727 Gene3D Vaccinia Virus protein VP39 122 184 IPR029063 -
Lele32g1327 727 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 604 723 IPR036873 -
Lele32g1327 727 Pfam Rhodanese-like domain 434 553 IPR001763 -
Lele32g1327 727 Pfam Rhodanese-like domain 603 718 IPR001763 -
Lele32g1327 727 Gene3D - 596 726 IPR036873 -
Lele32g1327 727 FunFam Sulfurtransferase 425 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1327 Lele-ChrLele32 14234268 14244938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1327 422 726 Sulfurtransferasese or Rhodanese AT1G79230 74.426 1.64e-171 493