Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1284 ATGCCAGGAAGTGGAGAAGTGACAGTTCCTCCAGGTTTCCGGTTTCACCCAACAGATGAAGAACTTCTTTACTATTACCTCAGGAAGAAGGTCTCTTACGAAGCCATTGACCTTGACGTCATCAGAGAAGTTGATATTAACAAACTTGAGCCCTGGGACCTCAAAGAGAAGTGTAGGATTGGATCGGGGCCACAGAACGAGTGGTATTTCTTCAGCCACAAGGACAAGAAGTACCCAACAGGGACAAGAACTAATAGGGCAACCACAGCTGGGTTTTGGAAAGCCACAGGAAGGGACAAGGCCATTTATCTCACTAATTCCCAGAGGATTGGCTTGAGAAAAACCCTTGTCTTCTACACCGGTCGTGCCCCTCATGGCCAAAAGACCGATTGGATCATTCACGAGTATCGTCTTGACGAACATGATGACCTCCATGTTCAGGAAGATGGGTGGGTAGTGTGTAGGGTTTTCAAGAAGAAGAACCTCAACAGAGGTTACCAGACACCAGAAATCGAAGAGGAAGAATACTTAGCTTCCCAAATGAGAACAAAAAGTGGATCAACCCATCAGCAGGTATTAGACCATCATCATCACATGCAAGCTCTATATGCTCATCATCGTCATAACTATAGCCAGCTTGATGGATCAATACACCTACCGCAATTGTTCAGTCCTGAATCTGCAGCCGTATTACCCGCGGCCCCCGCCGGCGCCACTTCTGAAAGAGTGGAGTGCTCTCAGAACTTGTTGAAGCTCACAAGCACAAGTGGACTCAATCTTAATCTCAATCATTATAATGACAATCACTGGTCATTCTTGGACAAGCTTCTTGCTTCTCACCACCACAGATACATGCGTTCTAATTCACATCATGATCATCATCATGCTGCTTCTGTGGCTTCTTCAACGACCCAGAAATTCCCAGCTGTTCATTACCTTGGCTGTGACACTACTCGTGACATTCTCAGGTTCTCTAAGTAG 981 0.4608 MPGSGEVTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDINKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLTNSQRIGLRKTLVFYTGRAPHGQKTDWIIHEYRLDEHDDLHVQEDGWVVCRVFKKKNLNRGYQTPEIEEEEYLASQMRTKSGSTHQQVLDHHHHMQALYAHHRHNYSQLDGSIHLPQLFSPESAAVLPAAPAGATSERVECSQNLLKLTSTSGLNLNLNHYNDNHWSFLDKLLASHHHRYMRSNSHHDHHHAASVASSTTQKFPAVHYLGCDTTRDILRFSK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1284 326 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Lele32g1284 326 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 239 - -
Lele32g1284 326 FunFam NAC domain-containing protein 18 163 - -
Lele32g1284 326 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Lele32g1284 326 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lele32g1284 326 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1284 Lele-ChrLele32 13763730 13765603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1284 1 326 NAC Transcription Factor Family AT1G79580 51.194 1.43e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele32g1284 NAM 9e-37 No_clan