Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1268 ATGGAGCTTGGCTTGAGATTAGGAGCTTCGAAGCCTTTCACTTTCATGGAAAATAATAACCCTCCTCAAGAACTCGCCTTAGGCCTCAACACTACCTTATCGATTGGTCCAATCACTACCACCAGCAAAGGCTGTGAAGAAGAAGAAGACAAGAAGAAGAAAAATCACAGTACTACTGTGAAAGAAGATCATGAAGCTTCGAATTATAAATTCCCTTCTGCTTCTCCTTCCTCTTCTTCCAAATCCAACAACAACTTACAGCTTCATCTTCTTCCTCACTCCAAACCTGTAACTCTATCTTCCTTCTCATGGCCTCCTCCTTCTGACAACTGTGATGAAGTGGGGGCTAATTCAGGGAGGGATTTGAAGGTGAAGACAAAGGAGGAGGAGGAAGAGTCGGAGGAGAGGACGGTGGTGTCGTCGTCTCCGATGAGTGGAGCGTCATCGTTTCAGGTGGATCTGTGTATATACAGTAGTAATAATAAAGGATCAGGGAATAATTACAACAACAGAAAGAGGCTGCAGAATAATGAATCAGAAGGTGAAGTAGGTAATTCTAATTATAATTACTACGATCAAAGGGGTTGTTCATCAAGAGCAAGCGATGAAGAGGACAACAACAACGTTGGTGGTGTTCGGGGTTGTGGTACCAGAAAGAAACTTAGGCTCTCTAAAGAACAATCTGCTTTTCTCGAAGAAAGCTTCAAAGAACACAGTACTCTTAATCCTAAACAAAAACTCGCTCTTGCCAAACAACTTAATCTTCGTCCTCGCCAAGTCGAAGTCTGGTTTCAAAACCGAAGAGCAAGGACGAAGCTGAAGCAGACGGAGGTGGATTGTGAATACTTGAAGAGATGCTGTGAGACTCTATCAGAAGAGAATAGGATTCTACAGAAGGAGCTTCAAGAACTGAGAGCTTTGAAGGCTTCAAACTCGAACCCTTTCTTCATGCAATTACCAGCCACCACCTTAACCATGTGCCCTTCCTGTGAGCGCGTTGCACCCAATAATTCCTCCTCCAATAATAATAATAATACTAATAATTCTGCTTCTTCCTCTAAACCCACAATTGCTTTCCCCTTCGCCAAACCCAAGTTCTATCCTTTTCCTCACTCCAAACCACACCAGTCTTGA 1134 0.4321 MELGLRLGASKPFTFMENNNPPQELALGLNTTLSIGPITTTSKGCEEEEDKKKKNHSTTVKEDHEASNYKFPSASPSSSSKSNNNLQLHLLPHSKPVTLSSFSWPPPSDNCDEVGANSGRDLKVKTKEEEEESEERTVVSSSPMSGASSFQVDLCIYSSNNKGSGNNYNNRKRLQNNESEGEVGNSNYNYYDQRGCSSRASDEEDNNNVGGVRGCGTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLSEENRILQKELQELRALKASNSNPFFMQLPATTLTMCPSCERVAPNNSSSNNNNNTNNSASSSKPTIAFPFAKPKFYPFPHSKPHQS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1268 377 MobiDBLite consensus disorder prediction 100 146 - -
Lele32g1268 377 MobiDBLite consensus disorder prediction 161 188 - -
Lele32g1268 377 Pfam Homeobox associated leucine zipper 274 308 IPR003106 GO:0006355|GO:0043565
Lele32g1268 377 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 56 351 - -
Lele32g1268 377 Coils Coil 287 310 - -
Lele32g1268 377 MobiDBLite consensus disorder prediction 36 86 - -
Lele32g1268 377 MobiDBLite consensus disorder prediction 43 68 - -
Lele32g1268 377 MobiDBLite consensus disorder prediction 116 137 - -
Lele32g1268 377 MobiDBLite consensus disorder prediction 334 357 - -
Lele32g1268 377 ProSiteProfiles 'Homeobox' domain profile. 214 274 IPR001356 GO:0003677
Lele32g1268 377 FunFam Homeobox-leucine zipper protein 18 201 279 - -
Lele32g1268 377 Gene3D - 222 272 - -
Lele32g1268 377 ProSitePatterns 'Homeobox' domain signature. 249 272 IPR017970 GO:0000981|GO:0006355
Lele32g1268 377 Pfam Homeodomain 218 272 IPR001356 GO:0003677
Lele32g1268 377 SMART HOX_1 216 278 IPR001356 GO:0003677
Lele32g1268 377 MobiDBLite consensus disorder prediction 334 356 - -
Lele32g1268 377 SUPERFAMILY Homeodomain-like 204 275 IPR009057 -
Lele32g1268 377 CDD homeodomain 218 275 IPR001356 GO:0003677
Lele32g1268 377 SMART halz 274 319 IPR003106 GO:0006355|GO:0043565
Lele32g1268 377 MobiDBLite consensus disorder prediction 70 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1268 Lele-ChrLele32 13602549 13604304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1268 178 369 Homeobox Transcription Factor Family AT4G37790 56.477 6.91e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele32g1268 Homeodomain 1.9e-15 CL0123