Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1266 ATGGAAAAGCCGCGAAACCAAAATCACCACCGTAACCCCGACCACAAGAACAACCACCGCCACCACCGTCAAACTTGGGGCAGGTGGGAGGAGCTTCTCCTCGCCTCCGCCGTCAAACGCCATGGCTCCAACGACTGGGACACCGTCTCCATGGAGATCCAGAACCGCACCAGCCTCCCTCACCTCCTCACCACCGCACGCAACTGCGAGCAGAAATTCCTCGATCTCGAACGCCGATTCACCGCCCAATGCAACGACGCCGTTCGGGAGTCTCCGGAGAATGGCGCTCCCGCCGGCGACGTCGTCGATCACGTTCCCTGGCTCGACGAATTGCGTAAGCTCCGGGTAGCTGAGCTCCGGCGAGAGGTCCAACGTCACGACGTTTCCATTCTGTCGTTGCAGCATAAGGTGAAGAGATTGGAGGAAGAGAGAGAGAAAAGCTTGACGGAGAATGACGCTGAACGAGATAAGAAACCAGATCTGGAAGACTCCGGGAAACCGGAAAACGACGAAAAGAACGGAGGAGGAGGAGAACCTGAACCGGCCAATTCTGAACCGGGGACGCGGGTCGAGGACGATGTAAATGATAATAGTAACGATAACAATAATAGTAATAACAGCGGTACTAATAAGCGTCCAACGGGGGACGACTCCGACCGGGACAACCAATCAGTTAATGAGTCTAATTCGACCGGTTCAAGATCCGCGGGAGAGAAAACCGGGGAGGAAGATGGGAAGCCTGAACCGCCTGCGGCTCAAGCCGGGCCGAAAAACCCGGATCCGAGTGGGGATAAAAAAGTGGAGGACTCGTCCGAGTTGAGAGACTCGGTGGCCCACTCGGAAGGGGGAGGGACGAGGGAGAGCGGCGAGGTGCAGAGCTCGGCGAGCTTGACGAGGAAGATGAAGACGCGAAAGAGGAAGAAGGTCTCCGGCGGAGGAGGTAACGGCGAGGAGGAGGCGCCGGAGAACGAAGAGGTGGCCACGAAATCACAACCGTTGGTTAGACTCTTGGAGCTGATCAAAGGGCATGAAAACAGCTCGTTGTTCGAGCGCCGTCTTGAAAGCCAGGAGGAATGGGAAAAATACAAAAGCGTGGTACGTGAGCACGTGGACTTAGAAATCATACAAACGCGGCTTCGAAACGGCAACTATTCCTCCGGCACCAACGCCTTCTTCCGTGACCTCTTCCTCCTCTTGACCAACTTCATCGCCTTCTTCCCCACCCACTCCCTCCACTCACGCGCCGCAACCCACCTCTGCAACCTCCTCTCCGACGAGATGAGGAACTTCTCCCAACCCCACAATGACAACACCCCTCCTTCAATCCCACCTCCGCCGCCCCCACCGTCGTCATCCTCAGTCAAGCCTGATTCTTCTAATAATAATTTGCTTTCCAAGCACAAGGCTTCTGCTCCCATACTGGTTTGCCGGAAACGCAGTTCCATGTCCAGTAAACCTTCCTCTGCTTCTACCTTTAAGGGTAGTGACCGTTTAAGCAGTGAGAAGAAACCACCACCACCCCAGAAGAGGCCACCGTCTTCGGTTTCTGATGATTCAGATGAAGAACCTCCTCCTCCTCCTCCTCCTCTGCCACCTATGTCAAAGGAGAAGCCGGTGACCGGAGCAAGAAGCATGAGAAGAGGCAACAAAAACCTCGGTGGTACCGGGGTCGGAGCCACTCAGAACAAGAAGCTTCAGTCCAGTAGTAAAGCAAGCCCTCCCAAATCAGATCACAAAAGCAAAGCAGCGGCAGCAGAAGAAGAAGAAGAACAAGCGGCCTCTGCGTCCGACAAAAAGAGGAGCGCAGTCGCAGATTTCTTGAAAAGGATAAAGAAAAACAGCCCCGGCGAGGCAATGAAGAGCGGTGGTGGGGGCGGCCGACGAGGGGGCCGCGGAAGAGATCAGAAGAAGGTGGTGGGAAGTGGCGGAAAGGGTGGGAGGGAGAGAACATTGAGGAATGTTGGTGGAACAGGGGAGAGGAATACGACAGAGAATAATAGCAATCAGACAACGTCAAAGAGAAGTGTAGGGAGGCCACCGAAGAAAGTAGCTGAAAGTAACAACAACAACAACAATAATGCCTCAGGTTCTGCTAAACGTGGAAGGGAAGGTGGTGGGGGGAAGGATAAAAGGCCCAAGAAACGAGGTAGGAAGTAA 2157 0.5461 MEKPRNQNHHRNPDHKNNHRHHRQTWGRWEELLLASAVKRHGSNDWDTVSMEIQNRTSLPHLLTTARNCEQKFLDLERRFTAQCNDAVRESPENGAPAGDVVDHVPWLDELRKLRVAELRREVQRHDVSILSLQHKVKRLEEEREKSLTENDAERDKKPDLEDSGKPENDEKNGGGGEPEPANSEPGTRVEDDVNDNSNDNNNSNNSGTNKRPTGDDSDRDNQSVNESNSTGSRSAGEKTGEEDGKPEPPAAQAGPKNPDPSGDKKVEDSSELRDSVAHSEGGGTRESGEVQSSASLTRKMKTRKRKKVSGGGGNGEEEAPENEEVATKSQPLVRLLELIKGHENSSLFERRLESQEEWEKYKSVVREHVDLEIIQTRLRNGNYSSGTNAFFRDLFLLLTNFIAFFPTHSLHSRAATHLCNLLSDEMRNFSQPHNDNTPPSIPPPPPPPSSSSVKPDSSNNNLLSKHKASAPILVCRKRSSMSSKPSSASTFKGSDRLSSEKKPPPPQKRPPSSVSDDSDEEPPPPPPPLPPMSKEKPVTGARSMRRGNKNLGGTGVGATQNKKLQSSSKASPPKSDHKSKAAAAEEEEEQAASASDKKRSAVADFLKRIKKNSPGEAMKSGGGGGRRGGRGRDQKKVVGSGGKGGRERTLRNVGGTGERNTTENNSNQTTSKRSVGRPPKKVAESNNNNNNNASGSAKRGREGGGGKDKRPKKRGRK 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1266 718 SUPERFAMILY Bromodomain 329 434 IPR036427 GO:0005515
Lele32g1266 718 Gene3D - 16 75 - -
Lele32g1266 718 Coils Coil 585 605 - -
Lele32g1266 718 MobiDBLite consensus disorder prediction 437 453 - -
Lele32g1266 718 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 14 718 - -
Lele32g1266 718 MobiDBLite consensus disorder prediction 480 495 - -
Lele32g1266 718 Pfam Myb-like DNA-binding domain 23 58 IPR001005 -
Lele32g1266 718 Pfam Bromodomain 335 416 IPR001487 GO:0005515
Lele32g1266 718 MobiDBLite consensus disorder prediction 197 212 - -
Lele32g1266 718 MobiDBLite consensus disorder prediction 261 281 - -
Lele32g1266 718 SMART sant 22 79 IPR001005 -
Lele32g1266 718 ProSiteProfiles Myb-like domain profile. 18 57 IPR001005 -
Lele32g1266 718 ProSiteProfiles Bromodomain profile. 341 413 IPR001487 GO:0005515
Lele32g1266 718 Coils Coil 123 157 - -
Lele32g1266 718 Gene3D - 320 438 IPR036427 GO:0005515
Lele32g1266 718 MobiDBLite consensus disorder prediction 141 329 - -
Lele32g1266 718 MobiDBLite consensus disorder prediction 627 643 - -
Lele32g1266 718 MobiDBLite consensus disorder prediction 505 535 - -
Lele32g1266 718 CDD Bromodomain 333 419 - -
Lele32g1266 718 MobiDBLite consensus disorder prediction 655 698 - -
Lele32g1266 718 SMART bromo_6 133 432 IPR001487 GO:0005515
Lele32g1266 718 MobiDBLite consensus disorder prediction 1 23 - -
Lele32g1266 718 MobiDBLite consensus disorder prediction 141 175 - -
Lele32g1266 718 MobiDBLite consensus disorder prediction 554 573 - -
Lele32g1266 718 MobiDBLite consensus disorder prediction 574 615 - -
Lele32g1266 718 SUPERFAMILY Homeodomain-like 18 58 IPR009057 -
Lele32g1266 718 MobiDBLite consensus disorder prediction 430 718 - -
Lele32g1266 718 CDD SANT 25 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1266 Lele-ChrLele32 13569851 13574670 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele32g1266 Bromodomain 2.9e-09 No_clan