Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1263 ATGCAAAAAGAGCCAGCTGGGCTTGAAGGCCGTTCTATTGATGTTGGTAATCTTAAAGTAAATGTCGTGAAGGCCATTGCTGAAGGGGGCTTCTCTTGTGTCTACTTGGCTCGTGATGCTGTACATATGTCAAAACAATATGCTTTGAAGCACATGATATGCAATGATGAAGAATCACTTGAATTAGTAAAGAAGGAGATCTCAGTCATGAAGGCATTGAAAGGGCATCCCAATGTTGTCACACTTTATGCTCATGCAATCTTTGATATGGGTAGGACAAAAGAGGCATTCCTTGTTATGGAATTTTGTGATAAGTCTCTAGTTAATGTGCTGGAGAACCGAGGAGCTGGTTATTTTGATGAAAAGCAGGTTCTGATAATCTTCAGGGATGTATGTAACGCAGTTTTTGCTATGCACTGCCAATCCCCACCTATTGCTCATCGGGACTTAAAAGCTGAGAATCTTTTATTAGGCCCAGATGGTTCATGGAAATTATGTGATTTTGGGAGTACTTCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGACAATATCAGGAAGCACACAACTCCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCTTGAGAGAAGTCATCAATGAGAAAGTGGACATATGGGCATTGGGGTGTCTCCTCTTCCGTATATGCTACTTCAAAAGCGCATTTGATGGTGAATCAAAGTTGCAAGTCTTAAATGGAAACTATCGCATTCCTGATGTCTGGTTTCGTGTCAATGAGCAGTTACCTATTGATCAGCACAAGTCATTACCTGATAGACCACCTGAATTGCCATCTTCCAACAATCACGAAGGTTCTGCAAAGCCTGTGACTCAATTATCTCCAATGCCTCGTCGGAGTCCACCTCCTCCACCATCATCTAGAGAAATTAAAACTTCATCACAGACATCCCATTCTAGGGGAGGGGGAAGTGGAGGGCAGCTTGGCGCTTTCTGGTCTACCATGCATGCAAAGGACTCGTCTGCCCCAGAGGTTATGAGCAGACCAATATTTGATGAAGAACCTTCTAGCCATCATGTCTCAGCAAAACAGGATAGAATTCGTCCAGACAATAACCAACTACCCAAAAATGTTAGTGGTAAAAAAGTGGATATTGGACAATCGCAAAATGTGAGAAACAGTGAACATGGAAAATCATACAAACCTGATACTGAATCTTCCAAGGACTTTGAAATAAAATTTTACCAGGACACACATCCTGCTGGTGAGAGGCGAGCTTCTTCAAGTAAGGAGAACGCAGCTTCCTTTGACGACAAGGCTTTTGACACATTTGTTACTGAATTTGATACCAGTAAGCTTAGCTCTGGATTCAGTGATAAAAAACCTGAAAAGGAGGAAGCATTAGAGGCTGAGGTGGAGAAACTCAAAATGCAGCTGAAGGAAGCTCGGCTGGAAAAAACTGAAATAACTTCAAAGTACGAAAAGCTCTCTGCTATTTGCCGATCTCAAAGGCAAGAGATCCAGGATCTCAAGCAAACCCTTGCTGTAAGAACTCCATCACCAAAGAAAGAGGGTCTGAGAGCTTCTCCTACGGTTCCATCATCTGTGGCTACTGTTCTTTTTGACACACTGCTAAAATTATTGTGTTTACCACCGCAGCGGGAGAAGGTTGGTGGGATGATATGGGAACTCGAGCAAAACAAAACTGAAACAAAAAGTCCCAGTTCAGAACCGAAGTCATGGCAAGCTTTTCCAGAGGAACCCCAGGAACAAAAGTCTGCTTCTGCTGACAATAGTAGAGCCAAATCTGTTAGGACTAGAAAAATGAATCAAAACGAGCAACCAGGTCAACCAAATTCAGATTTTGATACATGGGGTTTTGGAACAGATAGTTTCACTGCTGTATCTGCTGCAGGCAGCTCACAGGTGCCTAGACCCCCTGGCACTGGAGGGAGTAATAATCCTCAGGCTTTTGGTAATGTCAAGACATATGGGAACAAGTCAACTTCCCAACCTGCTGGGTGGGCCGGTTTCTAA 2037 0.4345 MQKEPAGLEGRSIDVGNLKVNVVKAIAEGGFSCVYLARDAVHMSKQYALKHMICNDEESLELVKKEISVMKALKGHPNVVTLYAHAIFDMGRTKEAFLVMEFCDKSLVNVLENRGAGYFDEKQVLIIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGPDGSWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKHTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDVWFRVNEQLPIDQHKSLPDRPPELPSSNNHEGSAKPVTQLSPMPRRSPPPPPSSREIKTSSQTSHSRGGGSGGQLGAFWSTMHAKDSSAPEVMSRPIFDEEPSSHHVSAKQDRIRPDNNQLPKNVSGKKVDIGQSQNVRNSEHGKSYKPDTESSKDFEIKFYQDTHPAGERRASSSKENAASFDDKAFDTFVTEFDTSKLSSGFSDKKPEKEEALEAEVEKLKMQLKEARLEKTEITSKYEKLSAICRSQRQEIQDLKQTLAVRTPSPKKEGLRASPTVPSSVATVLFDTLLKLLCLPPQREKVGGMIWELEQNKTETKSPSSEPKSWQAFPEEPQEQKSASADNSRAKSVRTRKMNQNEQPGQPNSDFDTWGFGTDSFTAVSAAGSSQVPRPPGTGGSNNPQAFGNVKTYGNKSTSQPAGWAGF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1263 678 SMART serkin_6 20 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1263 678 MobiDBLite consensus disorder prediction 354 410 - -
Lele32g1263 678 ProSiteProfiles Protein kinase domain profile. 20 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1263 678 MobiDBLite consensus disorder prediction 354 370 - -
Lele32g1263 678 MobiDBLite consensus disorder prediction 608 678 - -
Lele32g1263 678 MobiDBLite consensus disorder prediction 309 323 - -
Lele32g1263 678 MobiDBLite consensus disorder prediction 275 289 - -
Lele32g1263 678 MobiDBLite consensus disorder prediction 371 395 - -
Lele32g1263 678 MobiDBLite consensus disorder prediction 567 678 - -
Lele32g1263 678 PANTHER SERINE/THREONINE PROTEIN KINASE 5 253 - -
Lele32g1263 678 MobiDBLite consensus disorder prediction 396 410 - -
Lele32g1263 678 Coils Coil 465 513 - -
Lele32g1263 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lele32g1263 678 MobiDBLite consensus disorder prediction 567 600 - -
Lele32g1263 678 MobiDBLite consensus disorder prediction 266 330 - -
Lele32g1263 678 Pfam Protein kinase domain 22 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1263 678 SUPERFAMILY Protein kinase-like (PK-like) 22 254 IPR011009 -
Lele32g1263 678 Gene3D Transferase(Phosphotransferase) domain 1 4 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1263 Lele-ChrLele32 13541688 13544566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1263 19 278 CBL-interacting serine-threonine protein kinases AT5G45810 28.938 1.55e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lele32g1263 Pkinase 1.7e-36 CL0016