Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1253 ATGGCGCCGAAAACTGCCAGGATCACCAGAAATCCTGAATTGGTAAGAGGGGTCGGAAAGTTTTCGAGGTCGAAGATGTACCACAAGAGAGGATTGTGGGCCATCAAGGCTAAAAACGGCGGCGTTTTCCCTCATCACGATATCAAACCTAAGCCTGAAACTCCTGCCGAGAAGCCTCCCAAGTTCTACCCTGCCGACGACATTAAGAAGCCTCTCGTCAATAAGCACAAACCAAAACCTACTAAGCTCAGGGCCAGCATTACTCCTGGGACAGTATTGATACTTCTTTCTGGGAGATTCATGGGAAAGAGAGTAGTGTTCCTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTTACCGGTCCATTCAAGGTAAATGGAGTTCCTTTGAGGCGTGTAAGTCAGTCTTATGTCATTGGAACATCCATCAAGGTAGATATCTCCGGAGTTAATCTGGAGAAGTTTGAGGACAAATACTTCGCCAAGAAAGCTGAGAAGAAGCAGAAAAAGGGAGAGGGAGAGTTCTTTGGGGCAGAGAAGGAGGAGAAAAATGTGATCCCACAAGAGAAAAAAGATGACCAGAAAGTAGTGGATGCAGCATTGATAAAAGGCATAGGGAGCCATCCAGACTTGAAGGCTTATTTGGCTGCAAGGTTTTCTCTCAAGGCAGGCATGAAACCTCATGAGCTGGTCTTCTAA 696 0.4641 MAPKTARITRNPELVRGVGKFSRSKMYHKRGLWAIKAKNGGVFPHHDIKPKPETPAEKPPKFYPADDIKKPLVNKHKPKPTKLRASITPGTVLILLSGRFMGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVSQSYVIGTSIKVDISGVNLEKFEDKYFAKKAEKKQKKGEGEFFGAEKEEKNVIPQEKKDDQKVVDAALIKGIGSHPDLKAYLAARFSLKAGMKPHELVF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1253 231 MobiDBLite consensus disorder prediction 48 74 - -
Lele32g1253 231 PANTHER 60S RIBOSOMAL PROTEIN L6 1 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele32g1253 231 CDD KOW_RPL6 79 231 IPR041997 -
Lele32g1253 231 Pfam Ribosomal protein L6, N-terminal domain 5 59 IPR005568 GO:0003735|GO:0005840|GO:0006412
Lele32g1253 231 Gene3D - 85 169 IPR014722 -
Lele32g1253 231 SUPERFAMILY Translation proteins SH3-like domain 85 176 IPR008991 -
Lele32g1253 231 Pfam Ribosomal protein L6e 124 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele32g1253 231 MobiDBLite consensus disorder prediction 48 81 - -
Lele32g1253 231 FunFam 60S ribosomal protein L6 85 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1253 Lele-ChrLele32 13462734 13464453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1253 4 231 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 77.632 1.54e-115 328