Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1229 ATGACAGATCCTCAGTCTTGGTTCAACTTCATCCCTCTTCTTCATCCTCCTCATCACTGTTCTTCCTTTACTGCTACTACTTCTCATCAATCCAACGCCTGTACTAATTCCTTATACCCTCTTCATCATCATGCTCAGTACTCTAATCATAATCACTGCACATCATCACCGGCATCATCTTCCATTATTCAATACCAAAGCTCTTCAGCTAGTTCCTCCTCCACTTTATGCCCCCATCCTCCAAGTTCCCCTCCTCTCAAAGAAGCCCTGCCTCTCATCAACAATTTAAGCCTCACAACATCAAGTGAACCCTCAAAAAGAGCCCTAGAAGAGGAAGATGAAGAAAAGAATGAGAGAGTGGAGAAAGAATATGAAGAAGATGACGACGAAGATGATGACGATAGAGAAACTGTGACTGTAGCCCTAGGAATAGGGCTTCCTACTAGTATGAACACTTCTTTTTCTTCTTCTACTTCTTCAAGCAGGCTGCAGATCTCAAATTCTGTTGAAATGGCTGAAAAAGCGGAACTTGGTTTGGTTTCTGGATACCCTTTGGAGAGCTTAAACAAGGGTCAGTATTGGATTCCAACCCTTTCTCAGATTCTCGTTGGCCCTACTCAGTTCTCTTGCCGTCTATGCTTAAAGACTTTCAATAGATACAATAATCTTCAGATGCATATGTGGGGACATGGATCACAATACAGAAGAGGGGCAGATTCTCTAAAAGGGACACAACCAACGGGAATGCTAAGGCTACCATGTTACTGTTGTGCACCAGATTGCAAGCACAACATTGAGCATCCACGAGCCAGGCCTCTGAAGGACTTCAGGACTCTGCAGATTCACTACAAGAGGAAGCATGGAATCAAACCCTACATGTGCCGGAAATGCGGCAAGCTCTTCGCCGTCAAAGGCGACTGGAGGACTCACGAGAAGAACTGCGGCAAGCTCTGGTATTGTCTTTGTGGATCTGACTTTAAACACAAAAGGTCTCTTAAAGATCACGTCAAGGCCTTCGGGCATGGCCATGCAGATTCTAATTGCTTGCATAATAATAATGAAGACGACGAACCAGCTTCTGAGATTGAACAAGATGGTGATAACTCCTCCATGTGA 1116 0.4435 MTDPQSWFNFIPLLHPPHHCSSFTATTSHQSNACTNSLYPLHHHAQYSNHNHCTSSPASSSIIQYQSSSASSSSTLCPHPPSSPPLKEALPLINNLSLTTSSEPSKRALEEEDEEKNERVEKEYEEDDDEDDDDRETVTVALGIGLPTSMNTSFSSSTSSSRLQISNSVEMAEKAELGLVSGYPLESLNKGQYWIPTLSQILVGPTQFSCRLCLKTFNRYNNLQMHMWGHGSQYRRGADSLKGTQPTGMLRLPCYCCAPDCKHNIEHPRARPLKDFRTLQIHYKRKHGIKPYMCRKCGKLFAVKGDWRTHEKNCGKLWYCLCGSDFKHKRSLKDHVKAFGHGHADSNCLHNNNEDDEPASEIEQDGDNSSM 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1229 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 208 235 IPR013087 -
Lele32g1229 371 FunFam Zinc finger protein WIP2 261 343 - -
Lele32g1229 371 Coils Coil 106 130 - -
Lele32g1229 371 MobiDBLite consensus disorder prediction 116 135 - -
Lele32g1229 371 ProSitePatterns Zinc finger C2H2 type domain signature. 210 230 IPR013087 -
Lele32g1229 371 MobiDBLite consensus disorder prediction 64 135 - -
Lele32g1229 371 SMART c2h2final6 208 230 IPR013087 -
Lele32g1229 371 SMART c2h2final6 292 312 IPR013087 -
Lele32g1229 371 SMART c2h2final6 318 341 IPR013087 -
Lele32g1229 371 Gene3D Classic Zinc Finger 251 341 - -
Lele32g1229 371 SUPERFAMILY beta-beta-alpha zinc fingers 276 312 IPR036236 -
Lele32g1229 371 MobiDBLite consensus disorder prediction 348 371 - -
Lele32g1229 371 PANTHER ZINC FINGER PROTEIN WIP2 46 367 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1229 Lele-ChrLele32 13313199 13316431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1229 170 371 C2H2 Transcription Factor Family AT3G57670 73.892 8.62e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele32g1229 None None None