Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1227 ATGTGTATGTTGATACGCTCTTGGCCTCCGGATTCAGGGAAGTTAGAAAATGGCCTTTTATTGGTTCTAACAAGTAGAATCTTTCTTTTCAGGATTGTTGAAGCTACCTCGAACTGCATTCTGTTGAATTCGAAAGAGCTTGACTGTGTACATTACATAGATACGGGCTTTCCTTATACTGTTACTGAAAGCATCATGGACTTCTTTGAAGGCATCACGTATGTGCCAGCGAATTGTCTCCACAACGGATCCGTGCCTGATCAGTGCCCTGTTGTAGGAAGCCAGCACTTTGTTTTTCCGAAGTTGAAGTCTAGTCTTGAAAGTACCAACTGGATGATGAATACGAGCCCATACAAATACGACATGTCTGGCCCTTTGTGTCCATCTTATTTTGGTTATCCCGAATATATCCTTCCCTTACCAAGGATGGAGGTCAACAGGGGACAGTGGGAAAGCCCTTCAACAATGACCATTGAGGAGCCTGCCACAACAGACTCTTTGTCCAGAAGAGATGGAGTGTCTGGCATGCAGACTATTCCTGAAGAATGTTGCCCTAATCATCAAAATTCCCCTGGTACTCAGGTTGTATGGCAGCAAGACAGCATTGATCCTGATAATATGACTTATGAGGAATTACTGGACTTGGGTGAGGCAGTTGGAACTCAAAGCAGAGGCCTTTCCAAAGAACATATTGATTTGCTTCCAGTCTCAAAGTACAATCTTAAAAGCATGTTTAAAAGAAAAAACTATGGGAAAAGGTGTGTGATTTGTCAGATGACATACAAAAGAGGTGACGAACAAATGAAATTGCCATGCACGCATGTTTACCATAGTGAATGCATCTCCAAATGGCTTAGCATTAACAAGAAGTGCCCAGTTTGCAACACTGAGGTGTTTGGCGAGGATTCAAGGAATTAG 918 0.427 MCMLIRSWPPDSGKLENGLLLVLTSRIFLFRIVEATSNCILLNSKELDCVHYIDTGFPYTVTESIMDFFEGITYVPANCLHNGSVPDQCPVVGSQHFVFPKLKSSLESTNWMMNTSPYKYDMSGPLCPSYFGYPEYILPLPRMEVNRGQWESPSTMTIEEPATTDSLSRRDGVSGMQTIPEECCPNHQNSPGTQVVWQQDSIDPDNMTYEELLDLGEAVGTQSRGLSKEHIDLLPVSKYNLKSMFKRKNYGKRCVICQMTYKRGDEQMKLPCTHVYHSECISKWLSINKKCPVCNTEVFGEDSRN 305
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1227 305 ProSiteProfiles Zinc finger RING-type profile. 254 295 IPR001841 -
Lele32g1227 305 SUPERFAMILY RING/U-box 253 299 - -
Lele32g1227 305 SMART ring_2 254 294 IPR001841 -
Lele32g1227 305 FunFam E3 ubiquitin ligase BIG BROTHER 216 299 - -
Lele32g1227 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 299 IPR013083 -
Lele32g1227 305 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 48 301 IPR033276 GO:0004842|GO:0016567|GO:0046621
Lele32g1227 305 Pfam Ring finger domain 253 295 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele32g1227 Lele-ChrLele32 13273504 13277868 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1227 43 303 C3H Transcription Factor Family AT3G63530 45.802 1.89e-74 227