Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1224 ATGCGTATTGAAAGCAAAAGGCTTACGTTTGATAAAAAGAAAGATGATGATTACCTTCTAGATTTGGTGATGGGGAAGAACAAAATGATGAAGAACAACAACAATAACAGTAATATTAATAAGAGAAAGCTGAGGAAGGGGCTTTGGTCGCCGGAGGAAGACGAGAAGCTGATAAGGTACAAGTTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAACGCAGGACTTCTTCGTTGTGGCAAAAGTTGTCGTCTTCGTTGGATCAATTACCTCAGACCTGACCTCAAACGTGGTGCTTTTTCCCCTCATGAAGAACACCTCATCATTCATCTTCACTCTCTTCTTGGCAACAGATGGTCTCAAATTGCTGCATGTCTTGCTGGAAGAACAGACAACGAGATTAAGAATTTCTGGAACTCTACATTGAAGAAAAGGTTCAAAAACAACAACAACAACAACACTTCCTTGTCTTCATCACCAAACAAATCATCGTCGACGACATCCTCGTCATCAGAACCTAAGAATAAACATGTCTTGATAAGTGGAAACTCAAGCATGATCGACCCATTAATGCCCACGACATCATCGTCCTTGTCCACCATAATGCAAGTCCCTATCATCTTCGGAGATCAATTAGTTTCCGACAGTACCTTTTTCCCGTTGAATCATCATCACCATCATCATCTTGACATGAACAATGTTGAAGGAGCTGGTAATTTCCCTTTACCTGCGCAAGTTGCTGGCAATATAGAAGAAGAAGGGTTTTATAATAATGGAGATTATGGGACAGTATTACTAGAGCCAAGTAATATTGAGGAAAATAATAATAGTGTCCCAAATTTTGATGATATTATTAGTGTGAAAAGCCACTACAACAACTCCAATAATAGTTGCTTCAATTACACTAATGATCATCATCAAATAATTCATCAGAGCTCAAGTAAAGTTGAGGAAGATCAGGGAATGTTTGGGTTTGGAAATAGGAATAAGATCATCAATAATAATCATAGTATTATTAATGAGCACTTAGCAGTGAGAGATCAATGGGATTTGGAAGGTCTGATGCAAGACATGTCTTCTTTTCCCTTCCATGATTTTTCCAAGTTAGTCGAATAA 1122 0.3859 MRIESKRLTFDKKKDDDYLLDLVMGKNKMMKNNNNNSNINKRKLRKGLWSPEEDEKLIRYKLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPHEEHLIIHLHSLLGNRWSQIAACLAGRTDNEIKNFWNSTLKKRFKNNNNNNTSLSSSPNKSSSTTSSSSEPKNKHVLISGNSSMIDPLMPTTSSSLSTIMQVPIIFGDQLVSDSTFFPLNHHHHHHLDMNNVEGAGNFPLPAQVAGNIEEEGFYNNGDYGTVLLEPSNIEENNNSVPNFDDIISVKSHYNNSNNSCFNYTNDHHQIIHQSSSKVEEDQGMFGFGNRNKIINNNHSIINEHLAVRDQWDLEGLMQDMSSFPFHDFSKLVE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1224 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 97 IPR017930 -
Lele32g1224 373 SUPERFAMILY Homeodomain-like 44 140 IPR009057 -
Lele32g1224 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 148 IPR017930 -
Lele32g1224 373 CDD SANT 49 93 IPR001005 -
Lele32g1224 373 Gene3D - 43 99 - -
Lele32g1224 373 PANTHER MYB DOMAIN PROTEIN 55 37 320 - -
Lele32g1224 373 ProSiteProfiles Myb-like domain profile. 94 144 IPR001005 -
Lele32g1224 373 FunFam MYB transcription factor 43 99 - -
Lele32g1224 373 SMART sant 45 95 IPR001005 -
Lele32g1224 373 SMART sant 98 146 IPR001005 -
Lele32g1224 373 Pfam Myb-like DNA-binding domain 46 93 IPR001005 -
Lele32g1224 373 Pfam Myb-like DNA-binding domain 99 143 IPR001005 -
Lele32g1224 373 CDD SANT 101 144 IPR001005 -
Lele32g1224 373 ProSiteProfiles Myb-like domain profile. 41 93 IPR001005 -
Lele32g1224 373 MobiDBLite consensus disorder prediction 150 186 - -
Lele32g1224 373 Gene3D - 100 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1224 Lele-ChrLele32 13221240 13225141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1224 21 368 MYB Transcription Factor Family AT3G08500 46.175 3.66e-76 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele32g1224 Myb_DNA-binding 5.1e-12 CL0123