Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1222 ATGAATCTGATGGCAGACAATAATGGAAGTAATGTGCATGAACCAACACATGACAATAAGAAGAACAAATGGAAGTTGCCTCTCCTTGTTTTCTTCAACGATTTAAGAAATGTGTTCAAGATGGATTCGATTGGTCGGGAATTACTAGGAATTGCATTTCCAGCTGCTTTGGCTGTGGCTGCTGACCCTATTGCTTCTCTTATCGACACTGCTTTCATTGGTCACTTGGGACCTTTGGAACTTGCTGCTGCTGGAGTATCTATAACATTGTTCAACCAAGCTTCAAGGATCACCATCTTCCCTCTGGTCAGCATCACAACTTCATTTGTAGCAGAGGAAGATACTCTCAAGAAAATCTCAGGAACTAAACTATCGTCAGAAGATCATCAATCCAACAACGACAACAACAATTTTAATAATAAGAAGCCAACAAAAGAAAGTGTCGTAGATGATGAGGCCAACAACGTTAATGACATTGAAAAAGGTTGTTCCAAACAGAATCATCATCATCATGCTTCTGTAGTGGCAAACTCTTCTTCGTCTGCAAATAATAATAATGTTGAGTTTGAGAATTCTGATTCCTCTGATGCTTCTATCAAATACGACAAGAATAGTAATAAGAGCAAGAGTAGTTGTAAGAATAATCAGAGCAAGAAGACCAAAAGGAAACAGATAGCTTCAGCATCAACAGCATTAATATTTGGAACAATTCTTGGTCTCATTCAAGCATCAATCCTTATATTTGCTGCAAAACCTCTATTGCTTCTTATGGGTGCCAAACCAGGTTCTCCCATGCTGATTCTTGCGCAAAAGTATTTGAAATTGAGAGCCTTGGGTTCTCCTGCTGTCCTTCTAGCTTTGTCTATGCAAGGCGTCTTCCGAGGCTTCAAGGACACCACAACTCCCTTATATGTTATTGTTTTCGGGTATACCATAAATGTGGCGTTGGATCCAATACTTATATTTCACTTGAAGTTAGGCCTCAAAGGGGCAGCTATTGCACATGTCATCTCACAGTACTTGATGGCACTGGCTCTGTTGTTGATATTACTGAGAAGAGTTGATCTGTTACCTCCTAGTCTTAAGGATTTGCAGATTTTCCGGTTCCTTAAAAACGGAGGGTTGTTGATGTTAAAAGTAATAGCAGTAACATTCTGTGTGACATTTGCGGCTTCATTAGCAACAAGGTTGGGTCCCATTTCCATGGCTGCTTTCCAAACCTGTCAACAAGTTTGGATCACTACTTCCCTTCTTGCTGATGGCTTAGCTGTTGCTATTCAGGCAGTTCTAGCATGTTCGTTTGCTGAGAAAGACTATGTGAAGACCAAAGCAGCAGCCACAAGAGTACTTCAAATGACATTTGTAATGGGAGTAGGGCTGTCTCTGGTAGTAGGCATTGGATTGTACTTTGGAGCTGGCGTCTTCTCCAAAACCCCCACTGTTCTCCAACTCATCAGAATTGGCCTCCCTTTTGTAGCAGCAACACAACCGATCAATGCATTAGCGTTTGTGTTTGACGGTGTCAACTATGGAGCATCAGATTTTACATATGCAGCCACTTCTTTGGTAATAGTTTCAATTGTGAGCGTTGGAATAGAATATGCCATGTATAAGATGAAAGGCTTCGTTGGCATCTGGATTGCTTTGACTCTATATATGGCTCTTCGCATGCTTGCTGGTGTTTGGAGGATGGGAACAGGAACAGGACCTTGGCGTTTCCTTAGACAATGA 1731 0.4131 MNLMADNNGSNVHEPTHDNKKNKWKLPLLVFFNDLRNVFKMDSIGRELLGIAFPAALAVAADPIASLIDTAFIGHLGPLELAAAGVSITLFNQASRITIFPLVSITTSFVAEEDTLKKISGTKLSSEDHQSNNDNNNFNNKKPTKESVVDDEANNVNDIEKGCSKQNHHHHASVVANSSSSANNNNVEFENSDSSDASIKYDKNSNKSKSSCKNNQSKKTKRKQIASASTALIFGTILGLIQASILIFAAKPLLLLMGAKPGSPMLILAQKYLKLRALGSPAVLLALSMQGVFRGFKDTTTPLYVIVFGYTINVALDPILIFHLKLGLKGAAIAHVISQYLMALALLLILLRRVDLLPPSLKDLQIFRFLKNGGLLMLKVIAVTFCVTFAASLATRLGPISMAAFQTCQQVWITTSLLADGLAVAIQAVLACSFAEKDYVKTKAAATRVLQMTFVMGVGLSLVVGIGLYFGAGVFSKTPTVLQLIRIGLPFVAATQPINALAFVFDGVNYGASDFTYAATSLVIVSIVSVGIEYAMYKMKGFVGIWIALTLYMALRMLAGVWRMGTGTGPWRFLRQ 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1222 576 MobiDBLite consensus disorder prediction 121 221 - -
Lele32g1222 576 CDD MATE_DinF_like 62 566 IPR044644 -
Lele32g1222 576 TIGRFAM matE: MATE efflux family protein 54 546 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele32g1222 576 MobiDBLite consensus disorder prediction 144 167 - -
Lele32g1222 576 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 14 575 IPR044644 -
Lele32g1222 576 Pfam MatE 227 319 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele32g1222 576 Pfam MatE 377 534 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele32g1222 576 MobiDBLite consensus disorder prediction 170 194 - -
Lele32g1222 576 MobiDBLite consensus disorder prediction 125 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1222 Lele-ChrLele32 13185179 13190605 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1387 29 20624095 20631240 Lele32g1222 32 13185179 13190605 hybridization
Lele30g0167 30 1697127 1702492 Lele32g1222 32 13185179 13190605 hybridization