Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1197 ATGGTTGAACCTTGTCGTAAGCGCCCCAAAATTGCCAGAGGAGAAGATGATTATATGCCTGGAAGCATTATCGAGATTGAGCTTCTTAAGTTTATGACCTTTGACTTCTTAAAATGTAAACCTGGTCCTCGTCTGAATCTTGTTATTGGACCCAATGGTTCTGGGAAGAGTTCTCTTGTGTGTGCCATTGCACTTGGCCTCGGGGGTGAGCCTCAGCTTCTCGGGCGAGCAACAAGTATTGGATCATATGTGAAGCGGGGAGAAGAATCAGGTTGCATAAAGATTACACTGAGAGGGGATAGTAAAGATGAGCATATCACTGTTATTCGGAAAATAAATACTAGCAACAAGTCTGAATGGTCGTTCAATGGAAGAGTAGTGCCTAAAAAGGATGTGATAGGAGTCATTCAACGGTTTAACATCCAAGTTAATAATCTGACTCAATTTTTACCCCAGGACAGGGTCTGTGAATTTGCTAAATTAACTCCCGTGCAACTTCTGGAAGAGACCGAAAAGGCTACTGGTGATCCCCAACTCCCAATCCTTCACCGAGGTCTTGTTGATAAAAGCCGTGCATTGAAGCAAATTGAGCTGACAGTGAAGAAAAATGAAGAAACTTTGAAACAGCTAAAGGACCTTAATGCTGAACTTGAGAAGGATGTTGAACGTGTCCGTCAAAGGGATGAATTACTTAAAAAGGCTGAGTCCATGAAAAAGAAAGTGCCGTGGCTTAGATATGATATGAAGAAGGCTGAATACTTGGAAGATAAAGAACGTGAAAATGATGCTAAAAAGAAGATGGAGGAAGCTGCAAACATATTAAATGATCTTAAAGAACCTATCCAGTATGGCTACCTTGCTTACCAATCACATTTATTCTTAAATATCTTAGTAGCCCTTAAACTAGTGAGAGGGATGTCAGATCTGATTTCTTTAAGACACAGGAAACAGAAAAAGCACAAGGCAGCAATGGATAAGGAATATAAAAAAGTTGCCAACCTTATAAATGGCAATGCCAAGAAGCGAATGGAACTGCTGGAGAAAGAAAACCATCTGGGTGTGGAATTACAAGGAAAATACAATGAAATGGAAGATTTGAGGAGGCAGGAAGAAACTCGTAGGCAAAGATTTTTAAAGGCTAAGGAGGAACTTGCTGCTGCTGAACATGAACTAGAGAATCTGCCTCATTATGAACCTCCAAAGGAAGAGATTGAAAGGCTAAAAGATGAAATTCTGAACTTGCAAAATTCTGCATCTCAAAAGAGGCTAGAGAAGTCAGAAACAGACAAATTTTTGTATCAGAAAAAGTCGGCATTGGCACAGTGTATAGACAGGCTGAGGGAGATGGATAGTAAAAATACTAAGTGTTTGCATGCGTTACGAGAATCAGGGGCAGAGAGGGTAATGGAAGCTTATAAATGGGTGCAAGATAATCGCCATTTATTCAATAAGGAAGTTTATGGTCCTGTATTGCTGGAGGTTAGTGTCTCAAAGCAGGCTCATGCTGCCTTCCTGGAGGGTCATGTTCCTTATTACATCTGGAAGGTGCGTACTCTTGGTATCTACTCCCGTCTAGATGAAGTTTTTGATGCTCCTACATCTGTTAAAGAGGTTTTGATTGGACAGTTTGGTCTGGATCATTCATATATTGGTACCAGAGAAACTGATCAGAAAGCAGATAGGGTCCAACAATTGGGCATTTTTGACTTTTGGACTCCAGATAATCACTATCGTTGGTCTAAATCTAGATATGGGAATCATGTGTCAGGAGTTGTTGAACAAGTACAACGCTCAAGACTTCTTTCCTACAATATAGATGCAAGAGAAATCGAGAAGCTGAGGTCTCACAAAATGGACCTTGAAGAATCTATAGCAAACTTGGAGACAACATCTAGAAGGTTACAAGATGAGGAGAGACGCCTAAGCAATGAAGCAGCTAATCTTCGCAGACAGCGGGATGAAATAAACACTACTGTGCTTAAAGAGAAGGAAAAGTGCCGGGACATCATGCGCACTATTGAACTGAAGAAAAGGAGATTAGAATCAATGGCGGGGGAGGGTGATGTGGATATGGTCATTACTAAGCTGACTGATGAAGCTAGAAATTGTAATATTCAGCGATTCCACAATGCAATCAAAATTAAGAACCTACTTCTTGAGGCAATTGGTTATAGACGGAGTTTTGCTGGAAAGCATATGGCTATTCTTGACTTTGAGGCCAAGGCTCTCTGTGGTTATTTGTGCCTGGAGTTGGAGGCCAATTTGAAGCAGCATGAGAAGTTTGGTTTGCAAGCATCATTACACTTTGAAACCTGCAAGAAGGAGACTGAGAATTGTCGACAGCAGCTTTCAGAATGTTTGAGGCATGCTGAATCAATTGCTCTCATCACTCCACATCTTGAGAAGGAATTTCTTGAGATGCCCACTACTATTGAGGATTTGGAAGCTGCTATCCAAGACACCACTTCTCAAGCCAATTCTATACTTTTTGTCAATCATAATGTGTTGGAACAATATGAGAACCGTGAGCGTCAGATAGGAGCTTTAGCCACAAAACTTGAAGAAGATAAGAAGGGAGTTAGTAGGTGTCTATCTGAAATAGATACCCTAAAGGGGACATGGCTTCCAACATTGAGGAACCTTGTGGCACAGATAAATGAAACCTTTAGTCGTAATTTCCAAGAGATGGCTGTTGCAGGAGAAGTTTCACTAGATGAGCGTGATGTGGACTTCGATCAGTTTGGAATACTCATAAAAGTGAAATTCAGACCAACAGGACAGCTTCAAGAGCGATCAGTTTCTACTATTCTTTATCTTGTCTCTCTTCAAGATCTTACCAACTGCCCATTCAGAGTGGTTGATGAGATTAATCAAGGCATGGACCCGATAAACGAAAGAAAAATGTTCCAGCAACTAGTGAGAGCAGCCAGCCAGCCAAATACACCACAATGTTTCTTACTTACCCCAAAGTTGTTACCAGATCTGGAATACAGTGAAGTGTGCAGTATATTAAATGTAATGAATGGGCCTTGGATTGAGAAAGTCTCAGAAGCTTGGGGTGAAGGTGATCGATGGGGGAAAATTGCAGACTTGATGGTAGAGAATCAAAGGTGA 3114 0.4107 MVEPCRKRPKIARGEDDYMPGSIIEIELLKFMTFDFLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSIGSYVKRGEESGCIKITLRGDSKDEHITVIRKINTSNKSEWSFNGRVVPKKDVIGVIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKATGDPQLPILHRGLVDKSRALKQIELTVKKNEETLKQLKDLNAELEKDVERVRQRDELLKKAESMKKKVPWLRYDMKKAEYLEDKERENDAKKKMEEAANILNDLKEPIQYGYLAYQSHLFLNILVALKLVRGMSDLISLRHRKQKKHKAAMDKEYKKVANLINGNAKKRMELLEKENHLGVELQGKYNEMEDLRRQEETRRQRFLKAKEELAAAEHELENLPHYEPPKEEIERLKDEILNLQNSASQKRLEKSETDKFLYQKKSALAQCIDRLREMDSKNTKCLHALRESGAERVMEAYKWVQDNRHLFNKEVYGPVLLEVSVSKQAHAAFLEGHVPYYIWKVRTLGIYSRLDEVFDAPTSVKEVLIGQFGLDHSYIGTRETDQKADRVQQLGIFDFWTPDNHYRWSKSRYGNHVSGVVEQVQRSRLLSYNIDAREIEKLRSHKMDLEESIANLETTSRRLQDEERRLSNEAANLRRQRDEINTTVLKEKEKCRDIMRTIELKKRRLESMAGEGDVDMVITKLTDEARNCNIQRFHNAIKIKNLLLEAIGYRRSFAGKHMAILDFEAKALCGYLCLELEANLKQHEKFGLQASLHFETCKKETENCRQQLSECLRHAESIALITPHLEKEFLEMPTTIEDLEAAIQDTTSQANSILFVNHNVLEQYENRERQIGALATKLEEDKKGVSRCLSEIDTLKGTWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDERDVDFDQFGILIKVKFRPTGQLQERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEVCSILNVMNGPWIEKVSEAWGEGDRWGKIADLMVENQR 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1197 1037 Coils Coil 193 234 - -
Lele32g1197 1037 Coils Coil 610 665 - -
Lele32g1197 1037 Coils Coil 250 277 - -
Lele32g1197 1037 Coils Coil 404 424 - -
Lele32g1197 1037 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 516 1028 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Lele32g1197 1037 Pfam RecF/RecN/SMC N terminal domain 23 977 IPR003395 -
Lele32g1197 1037 CDD ABC_SMC5_euk 21 167 - -
Lele32g1197 1037 Gene3D - 22 218 IPR027417 -
Lele32g1197 1037 Coils Coil 836 856 - -
Lele32g1197 1037 CDD ABC_SMC5_euk 920 1012 - -
Lele32g1197 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 978 IPR027417 -
Lele32g1197 1037 Gene3D - 747 994 IPR027417 -
Lele32g1197 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 275 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1197 Lele-ChrLele32 12679450 12701740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1197 1 1028 Structural Maintenance of Chromosomes family AT5G15920 57.539 0.0 1212