Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1190 ATGTTCTTCATCAAGCAAATCCATCATCGTCTTCTTCATCTTCTTCTTCTGTCTCTTGTCATTATTCTTTCAGTTTCTTCTGTGGCCTCTGGTTTCCATGGAAACCAGCAAGCAAAAGCTCATGACAAGTTTCAGAAGCTAATAAAGTACTCGAGAGGCCAAAATAATAAGAGGAGCCTTTTTGAAGAAGCAGAAGAGATTATTGATATCGAAGCTCATGTTCATAAGGATCAAGAAGGTTTGAAAGAGAAAGACAGAATCGAGAAGCTTCCAAGTCAACCTCTGGTTAAGTTTTCTCAGTATGGAGGATATGTGACTGTGAATGAAGAAGCAGGACGTGCCTTTTATTATTATTTCACTGAAGCATTTAAGAATAAGCAGAATTTGCCCCTCGTTCTCTGGCTTAATGGAGTTGTAAATATATTGTTCCTGGAGTCACCAGCTGGAGTGGGGTTTTCATATTCAAACAAAACATCAGATTATGAAAACAGTGGAGATCAAAGAACAGCTATAGATAACTATATATTCTTGTTGAATTGGTTGGAGAGGTTTCCTGAATATAAGAATAGGGGTTTCTACATTACTGGAGAAAGTTACGCTGGTCATTATGTTCCTCAACTTGCTCAAACTATTATCCAACATAACATCAAAGCCAACAAGACCATCATCAACCTCAAAGGAATCTTGATAGGAAATGCAGCGATAAATGATGAGACGGACGAGAAGGGAATGTACGATTTCCTAGGAAGCCATGCGATTATGTCGGATTCAACAACTTCGACGATCGACAAGTTCTGTGATTTCTCTAAAAATGCAGACCATCAACCGAAAGAGTGCAATGAAGCTTTGGAGGAAGTAGACAGAGATTCTTACTATATTGATATCTACAACATCTATGCTCCCCTCTGCAACAACCCTAATCTCACTGACACTCCCAAGCCCACAACTATTGTGTTGGACGAATGCAATGAATATTATATGATAGCATATTTAAATAGAGAGGAAGTTCAAGAGGCACTTCATGCGAATGTGACAAAACTCAAGTACAATTGGTCACCTTGCAGTGATGTGATCTCAGAATGGCATGATAGGCCTTCCACCACTCTTCCCCTCTTACGTCAAATCATGCACCATGGAATTAGGGTTTGGCTTTTCAGTGGAGACGTTGATGGAAGAGTGCCATTTACTGCAACACAATACGCTCTGAGCTCTATGAGTATGAAAGTCAAAACTCCATGGCATCCTTGGTACCTCAATGGACAGGTTGCAGGGTACACACAAGTGTACAAGGGAGAGTTAACATTTGCAACAGTGAGGGGCGCAGGGCATCAAGTGCCCAGCTACCAGGCAGCAAGATCTCTTTCAATGTTCAAACACTTCTTGGATGGCTCTCCTCTTCCTGATACTACTAGATATTAA 1419 0.4066 MFFIKQIHHRLLHLLLLSLVIILSVSSVASGFHGNQQAKAHDKFQKLIKYSRGQNNKRSLFEEAEEIIDIEAHVHKDQEGLKEKDRIEKLPSQPLVKFSQYGGYVTVNEEAGRAFYYYFTEAFKNKQNLPLVLWLNGVVNILFLESPAGVGFSYSNKTSDYENSGDQRTAIDNYIFLLNWLERFPEYKNRGFYITGESYAGHYVPQLAQTIIQHNIKANKTIINLKGILIGNAAINDETDEKGMYDFLGSHAIMSDSTTSTIDKFCDFSKNADHQPKECNEALEEVDRDSYYIDIYNIYAPLCNNPNLTDTPKPTTIVLDECNEYYMIAYLNREEVQEALHANVTKLKYNWSPCSDVISEWHDRPSTTLPLLRQIMHHGIRVWLFSGDVDGRVPFTATQYALSSMSMKVKTPWHPWYLNGQVAGYTQVYKGELTFATVRGAGHQVPSYQAARSLSMFKHFLDGSPLPDTTRY 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1190 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 140 449 IPR001563 GO:0004185|GO:0006508
Lele32g1190 472 Gene3D alpha/beta hydrolase 81 137 IPR029058 -
Lele32g1190 472 Gene3D alpha/beta hydrolase 138 305 IPR029058 -
Lele32g1190 472 FunFam Carboxypeptidase 141 305 - -
Lele32g1190 472 FunFam Carboxypeptidase 319 466 - -
Lele32g1190 472 Pfam Serine carboxypeptidase 139 463 IPR001563 GO:0004185|GO:0006508
Lele32g1190 472 Pfam Serine carboxypeptidase 94 137 IPR001563 GO:0004185|GO:0006508
Lele32g1190 472 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Lele32g1190 472 Gene3D - 368 463 - -
Lele32g1190 472 FunFam Carboxypeptidase 368 463 - -
Lele32g1190 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Lele32g1190 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Lele32g1190 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Lele32g1190 472 Gene3D - 322 359 - -
Lele32g1190 472 SUPERFAMILY alpha/beta-Hydrolases 96 467 IPR029058 -
Lele32g1190 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 433 450 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1190 Lele-ChrLele32 12293634 12299534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1190 330 466 Calmodulin-binding Proteins AT2G22960 34.307 2.42e-20 86.7