Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1175 ATGACTATGGCTTTAGATTCTAAACAGAAACGTTCTTACGAAGAAGAAGAAGAAGATTCGTATTGTCTTTCTGCCATGCTTCTGTGTTGCAGCCAGGTCTACTGTGCTGCTCTTAAAGCTTCGCTTGAGCTCAACTTGTTTGGGATCATAGCTACGGAAGGAGGAACACACGTGTGGGCCTCTGAAGTAGCTTCAAAGCTTCCAACTTCATCTCAACACAAAGATTTGGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTGCTGAATTGTTCATCTCGTGAGAAAGAAGATGGTGATGGCACCGAGATTCTCTATGCAATTTCTCCTGTTGGAAAGTACTTTCTTATCTATAATGGTGGATTATGTGATGCTGCCTCATTCAAGTGTCATCAAGCACTTGTTGATGTCTGGTTGAATTTTAAGGAAGCAATAATAGACGAAGACACAGACTTGTTCAAGAAAATTCATGGAATGACAATGTACCAATATGCAAAGACAGATCCGACGTTGAACAAAACATTCAACAAAGCAATGGCCAATGTTTGCAACATAGAAATGAGAAGGATTCGGGAAATATACAAAGGATTCGAGGGAATATCAACGCTTGTTGATGTTGGAGGTGGCACTGGCCAAAACCTCAGAATGATTGTCTCTAAGTACCCTTCAATTAAGGCTATTAATTTTGATTTGCCCCAAGTTATTCAAAATGCACCACCTCATCCAGGGATTGAGCATGTTGGAGGGGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCCTCATATTGAAGGAGTCATGGAATTCTACAAATGACTTGTTTGCTTTGCTTGCTACCAGTTTGGATTTATATTGCATCGAAACTGTCAGTGGCTCTATTGCCACCGGCGGCTTAGCTCTTGAATGCGTCCTTTTAGGAGTTGAATTGAAGGCTGGGAACATTGGTGGAATCGACGTGCTTCTAGAACTCGCCGATGCCGCCAGTTGCTGCGGCCGGCACATGAAAAGAGCATTTTTGACGGTGAATGCTGCCGAATCTACAGCTGTCAAGAATGCCTTAGGGGTAAATGGGTTTTTATCTGGAGATGTCGAATCCACATTACAACTGGAGGTGCCGATGGCTCCGGTGAAGCCCACTGCTTTAACGAATAACAACAACCATCCTGAACGCAACGGGAAGGATAAGAAAGAAAACAGTGGAGAAATGGAGAGAAGAAGAAGATGGAGTATGAAAAGAACAACGTGTAAGCTTACAGAGAATGATGAGAAGGGGATGAAGAGAAGGAAGAAGAAGCTCTTCGTCGTATGA 1320 0.4295 MTMALDSKQKRSYEEEEEDSYCLSAMLLCCSQVYCAALKASLELNLFGIIATEGGTHVWASEVASKLPTSSQHKDLAFRIDRLLRLLASHSLLNCSSREKEDGDGTEILYAISPVGKYFLIYNGGLCDAASFKCHQALVDVWLNFKEAIIDEDTDLFKKIHGMTMYQYAKTDPTLNKTFNKAMANVCNIEMRRIREIYKGFEGISTLVDVGGGTGQNLRMIVSKYPSIKAINFDLPQVIQNAPPHPGIEHVGGDMFESVPKGDALILKESWNSTNDLFALLATSLDLYCIETVSGSIATGGLALECVLLGVELKAGNIGGIDVLLELADAASCCGRHMKRAFLTVNAAESTAVKNALGVNGFLSGDVESTLQLEVPMAPVKPTALTNNNNHPERNGKDKKENSGEMERRRRWSMKRTTCKLTENDEKGMKRRKKKLFVV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1175 439 Pfam Dimerisation domain 37 88 IPR012967 GO:0046983
Lele32g1175 439 MobiDBLite consensus disorder prediction 392 413 - -
Lele32g1175 439 FunFam Caffeic acid 3-O-methyltransferase 4 119 - -
Lele32g1175 439 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 281 IPR029063 -
Lele32g1175 439 MobiDBLite consensus disorder prediction 381 413 - -
Lele32g1175 439 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 382 IPR016461 GO:0008168
Lele32g1175 439 Gene3D - 158 194 IPR036388 -
Lele32g1175 439 Gene3D Vaccinia Virus protein VP39 176 270 IPR029063 -
Lele32g1175 439 Gene3D - 2 119 IPR036388 -
Lele32g1175 439 PANTHER O-METHYLTRANSFERASE 32 272 IPR016461 GO:0008168
Lele32g1175 439 Pfam O-methyltransferase domain 142 269 IPR001077 GO:0008171
Lele32g1175 439 SUPERFAMILY "Winged helix" DNA-binding domain 17 120 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1175 Lele-ChrLele32 12057297 12062143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1175 18 268 Monolignol Biosynthesis Gene Families AT5G54160 49.802 2.64e-75 238