Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1174 ATGGCTTTGTATTCTAAAGAAGATTCATACGGCCTTTCTGCCATGGTTCAGTGTTGTAGCCATGTCTACTGTGCAGCTCTTAAAGCTTCGCTTGACCTCAACTTGTTTGAGATCATAGATAAGGAAGGAGGAAGACACGTGTCAACCTCTGAAATAGCTTCAAAGCTTCCAACTTCATGTCAACACAAAGATTTAGCTTTCAGAATCGACCGTCTCTTGAGGCTTCTTGCAAGCTACTCTCTTCTGAACTGTTCATCTCGTGAGAAAGAAGATGGTGATGGTACTGAGAGACTCTACGCAATTTCTGCTGTTGGAAAGTATTTTGTTGCTGGGGACGATGATGGTGGATACTCGATTCTGTTCTCATCATTCCTTGGGATCAAGCATGTTGGAGGGAGTATGTTTGAAGGTGTTCCGAAAGGTGATGTCATTATGTTGAAGGCTGTATGCCACAATTGGTCAGATGAAAATAGCATAAAAGTGTTGAAGAAATGCCATGAAGCATTACCAGAGAAAGGGAAGGTGATAGTTATGGAATGCATAATGCCTGAAGTAATTGAAACAACAGAAGAAGCCAAGTTTGTAGCAAGCGTGGACAACATCATGTTCCTTCATGATGGAAGAGAAAGAACTGAGAAAGAATTTGAATCTCTTTGCAAACGTTCTGGCTTTTCTGGGTTCAAAGTCGCTTCTCGTGCTTTCTCTGCTTTTGGGGTTATGGAATTCTACAAGTAA 735 0.415 MALYSKEDSYGLSAMVQCCSHVYCAALKASLDLNLFEIIDKEGGRHVSTSEIASKLPTSCQHKDLAFRIDRLLRLLASYSLLNCSSREKEDGDGTERLYAISAVGKYFVAGDDDGGYSILFSSFLGIKHVGGSMFEGVPKGDVIMLKAVCHNWSDENSIKVLKKCHEALPEKGKVIVMECIMPEVIETTEEAKFVASVDNIMFLHDGRERTEKEFESLCKRSGFSGFKVASRAFSAFGVMEFYK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1174 244 Pfam Dimerisation domain 26 77 IPR012967 GO:0046983
Lele32g1174 244 PANTHER O-METHYLTRANSFERASE 21 112 IPR016461 GO:0008168
Lele32g1174 244 Gene3D Vaccinia Virus protein VP39 123 232 IPR029063 -
Lele32g1174 244 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 235 IPR029063 -
Lele32g1174 244 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 244 IPR016461 GO:0008168
Lele32g1174 244 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Lele32g1174 244 FunFam Caffeic acid 3-O-methyltransferase 2 108 - -
Lele32g1174 244 Pfam O-methyltransferase domain 126 225 IPR001077 GO:0008171
Lele32g1174 244 Gene3D - 2 108 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1174 Lele-ChrLele32 12046409 12049876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1174 122 234 Monolignol Biosynthesis Gene Families AT5G54160 56.522 1.22e-38 136