Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele32g1173 | ATGGCTTTGGATTCTAAAGAAGATTCATATTGTCTTTCTGCTCTGCTTCAGGGCTGTAGCCAGGTCTACTGTGCAGCTCTAAAAGCTTCGCTTGAGCTCAACTTGTTTGAGATCATAGCTAAGGAAGGAGGAAGACACGTGTCAGCCTCTGAAGTAGCTTCAAAGCTTCCAACTTCATGTCAACACAAAGATTTAGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTCGCGAGTCACTCTCTTCTGAATTGTTCATCTCGTGAGAGAGAAGATGGTGATGGCTCTGAGAGAGTGTATGCAATTTCTCCTGTTGGAAAGCACTTTGTTGGCGGGGACGATGATGCAGGACTCTTGACTCTCTTCTCATCATTCATTTGTCATAAGGCACTTATGGATGCTTGGATGAATTTTAAGGTGGCAATTATAGAAGAAGACAATGATTTATTCAAGAAAGTTCATGGAATGCCAATGTACCAATATGCAGAGAGAGATCCAACATGGAACAACATTTTCAACAAAGCAATGGCCAACCGTTGCAACATAGAGATGAATAGAATATTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTTGGTGGTGGCACTGGCCAAAACCTCAAAATGATTGTCTCTAAGTACCCTTCGATTAGGGCTATTAATTTTGATTTGCCTAGTGTTATTCAAAATGCACCACCTCATCCAGGGATCGAGCATGTTGGAGGGGATATGTTTGAAAGTGTTCCGAAAGGTGATGTCATTATGTTGAAGGCCGTATGCCACAATTGGTCAGATGAAAATAGCATAAAAGTGTTGAGGAAATGCCATGAAGCATTACCAGAGAAAGGGAAGGTGATAGTGGTGGAGTACATAATGCCTGAAGAAATTGGAGCAACAGAAGAAGCCAAGTTCGTAGCAGGCTTGGACAACCTCATGTTCCTTCATGATGGAAGAGAAAGAACTGAGAAAGAATTTGAATCTCTTTGCAAACGTTCTGGCTTTTCTGGCTTCAAAGTCGCTTCTCGTGCTTTCTCTGCTTTAGGAGTTATGGAATTATACAAGTAA | 1074 | 0.4143 | MALDSKEDSYCLSALLQGCSQVYCAALKASLELNLFEIIAKEGGRHVSASEVASKLPTSCQHKDLAFRIDRLLRLLASHSLLNCSSREREDGDGSERVYAISPVGKHFVGGDDDAGLLTLFSSFICHKALMDAWMNFKVAIIEEDNDLFKKVHGMPMYQYAERDPTWNNIFNKAMANRCNIEMNRILEIYKGFEGISTLVDVGGGTGQNLKMIVSKYPSIRAINFDLPSVIQNAPPHPGIEHVGGDMFESVPKGDVIMLKAVCHNWSDENSIKVLRKCHEALPEKGKVIVVEYIMPEEIGATEEAKFVAGLDNLMFLHDGRERTEKEFESLCKRSGFSGFKVASRAFSALGVMELYK | 357 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele32g1173 | 357 | Gene3D | Vaccinia Virus protein VP39 | 168 | 345 | IPR029063 | - | |
| Lele32g1173 | 357 | FunFam | Caffeic acid 3-O-methyltransferase | 1 | 108 | - | - | |
| Lele32g1173 | 357 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 15 | 357 | IPR016461 | GO:0008168 | |
| Lele32g1173 | 357 | CDD | AdoMet_MTases | 198 | 295 | - | - | |
| Lele32g1173 | 357 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 124 | 345 | IPR029063 | - | |
| Lele32g1173 | 357 | FunFam | Caffeic acid O-methyltransferase | 112 | 357 | - | - | |
| Lele32g1173 | 357 | Gene3D | - | 22 | 186 | IPR036388 | - | |
| Lele32g1173 | 357 | PANTHER | O-METHYLTRANSFERASE | 24 | 339 | IPR016461 | GO:0008168 | |
| Lele32g1173 | 357 | SUPERFAMILY | "Winged helix" DNA-binding domain | 8 | 113 | IPR036390 | - | |
| Lele32g1173 | 357 | Pfam | Dimerisation domain | 26 | 77 | IPR012967 | GO:0046983 | |
| Lele32g1173 | 357 | PIRSF | O-mtase | 1 | 357 | IPR016461 | GO:0008168 | |
| Lele32g1173 | 357 | Pfam | O-methyltransferase domain | 134 | 338 | IPR001077 | GO:0008171 | |
| Lele32g1173 | 357 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele32g1173 | Lele-ChrLele32 | 12036887 | 12040028 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele32g1173 | 7 | 357 | Monolignol Biosynthesis Gene Families | AT5G54160 | 48.732 | 5.70e-112 | 329 |