Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1163 ATGTCAGCTAGGGTCGAAACTACAGCAGCCGCTATGGTTCTGAAGACGGAGTTATGTCGTTTTAGTGGGGGAAAGATCTACCCTGGGAAGGGCATCAGATTTGTTCGTAGTGATTCTCAGGTCTTTTTGTTTGCCAACTCAAAATGCAAGAGGTACTTCCACAACAGATTGAAGCCATCAAAGCTCACCTGGACTGCCATGTACAGGAAGCAACACAAGAAGGACATTGCCCAAGAAGCTGTGAAGAAGAGGCGTCGCACCACCAAAAAGCCTTACTCTAGGTCAATTGTTGGCGCTACTTTGGAAGTTATCCAGAAGAAGAGAACTGAGAAACCAGAGGTTCGAGATGCTGCTAGAGAAGCCGCTCTGCGTGAGATTAAGGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAGGCAGAAGTTATGGCGAAAGCACAAAAAGCACAAGGAAAAGGAAACGTTCCCAAGGGTGCTGTCCCTAAAGGTCCTAAGCTTGGTGGAGGTGGCGGCAAGCGCTGA 528 0.4773 MSARVETTAAAMVLKTELCRFSGGKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKAQKAQGKGNVPKGAVPKGPKLGGGGGKR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1163 175 MobiDBLite consensus disorder prediction 129 175 - -
Lele32g1163 175 Coils Coil 123 154 - -
Lele32g1163 175 CDD Ribosomal_L24e_L24 14 67 IPR000988 -
Lele32g1163 175 FunFam 60S ribosomal protein L24 14 75 - -
Lele32g1163 175 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 69 - -
Lele32g1163 175 Gene3D Ribosomal protein L24e 14 75 IPR038630 -
Lele32g1163 175 Gene3D - 80 154 - -
Lele32g1163 175 PANTHER 60S RIBOSOMAL PROTEIN L24 15 167 IPR000988 -
Lele32g1163 175 Pfam Ribosomal protein L24e 15 78 IPR000988 -
Lele32g1163 175 ProSitePatterns Ribosomal protein L24e signature. 21 38 IPR023442 -
Lele32g1163 175 SMART 4TRASH 19 57 IPR011017 -
Lele32g1163 175 MobiDBLite consensus disorder prediction 129 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1163 Lele-ChrLele32 11914871 11916628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1163 12 168 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.350 1.11e-88 255