Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele32g1158 | ATGTTCCAGGCACGCTTCTGGGTTTTTCCTCGTTTTCGTTTTCGTTTGGTGCTTGATGAGTCTTTCTCTGATTTCCCGTGGTTACGAATAGTGACCATGATTCATTTCGCACATAAATTTCATATAGCGCTTGAGTCGGCCTTGGTTTTTCCAAATGGTATTTACATTGTTGTGATGGTACCCTCACCTGTTTTTATTAACCTCTATAATGATGTGTTGCGATTCACATGTCTTGTGTCATCACAATTAGAAAATGATTTCTTTTGCTTTTCTTGTGAAAATATTTTTGCTTGGAAGCATAAACACGTTGACAGAATATGCTACTTGCTTTTGCCTTGTGATGAATGTTGTTTCGCTTGACTGGTGGTTGTTTGTACTAGCATGGCTTCTAGCAATCTATTCTTTGATGATATACGGAGCAAATCTGAGGTTGATCCTGCTTCAAATGAGGAGCCAATGGACATCAGTGAGCTAGTGAATGATCCTGCACAAACTGCGCTAAAATCTAATGTGGCTGTTACAAGCAGTGTTCATGAACTTTTAGAGTGTCCCGTGTGCTTGAATGCCATGTACCCTCCAATCCACCAGTGTTCAAATGGCCATACTTTGTGCTCAAGTTGCAAACCCAGGGTCCACAACCGGTGTCCTACCTGTAGACATGAGCTTGGCAATATTAGATGCTTGGCATTGGAGAAGGTAGCTGCGTCTTTGGAACTTCCTTGTAAATACCAGGCTTTTGGGTGCATGGGCATATATCCGTATTACTGCAAGTTGAAGCATGAATCTCAATGTGCATATAGACCATATAACTGTCCATATGCTGGTTCAGAATGCACTGTCATTGGCGATATTCCTTTTCTGGTGGCTCATTTGAAAGATGATCACAAAGTGGACATGCATAATGGGAGCACTTTTAATCATCGTTATGTCAAATCAAACCCCCAAGAAGTTGAAAATGCCACATGGATGCTTACGGTCTTCAGCTGCTTTGGTCAATATTTTTGTCTACACTTTGAAGCTTTTCAGCTGGGTATGGCTCCAGTCTACATAGCCTTCTTGCGATTCATGGGTGATGATAATGAGGCAAAGAACTATAGCTACAGTCTCGAGGTTGGTGGTAATGGGAGGAAGATGACTTGGCAGGGTGTGCCTAGAAGCATCAGGGACAGCCACCGCAAGGTTCGTGACAGTTTTGACGGTCTTATCATCCAAAGGAACATGGCTCTCTTCTTTTCCGGGGGAGACAGGAAGGAATTGAAGCTAAGGGTTACAGGGAGAATTTGGAAAGAACAGTGA | 1296 | 0.4267 | MFQARFWVFPRFRFRLVLDESFSDFPWLRIVTMIHFAHKFHIALESALVFPNGIYIVVMVPSPVFINLYNDVLRFTCLVSSQLENDFFCFSCENIFAWKHKHVDRICYLLLPCDECCFAXLVVVCTSMASSNLFFDDIRSKSEVDPASNEEPMDISELVNDPAQTALKSNVAVTSSVHELLECPVCLNAMYPPIHQCSNGHTLCSSCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQAFGCMGIYPYYCKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMTWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ | 431 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele32g1158 | 431 | CDD | Sina | 297 | 425 | - | - | |
Lele32g1158 | 431 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 236 | 291 | IPR013083 | - | |
Lele32g1158 | 431 | ProSiteProfiles | Zinc finger RING-type profile. | 183 | 219 | IPR001841 | - | |
Lele32g1158 | 431 | FunFam | E3 ubiquitin-protein ligase SINAT5-like | 292 | 424 | - | - | |
Lele32g1158 | 431 | SUPERFAMILY | TRAF domain-like | 236 | 428 | - | - | |
Lele32g1158 | 431 | Pfam | Seven in absentia protein family | 225 | 424 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Lele32g1158 | 431 | CDD | RING-HC_SIAHs | 181 | 219 | - | - | |
Lele32g1158 | 431 | FunFam | E3 ubiquitin-protein ligase SINAT5-like | 141 | 234 | - | - | |
Lele32g1158 | 431 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 163 | 430 | - | - | |
Lele32g1158 | 431 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 138 | 235 | IPR013083 | - | |
Lele32g1158 | 431 | SUPERFAMILY | RING/U-box | 177 | 224 | - | - | |
Lele32g1158 | 431 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 292 | 424 | IPR008974 | GO:0005515 | |
Lele32g1158 | 431 | ProSiteProfiles | Zinc finger SIAH-type profile. | 236 | 296 | IPR013010 | GO:0008270 | |
Lele32g1158 | 431 | FunFam | E3 ubiquitin-protein ligase SINAT3 | 235 | 291 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele32g1158 | Lele-ChrLele32 | 11815171 | 11819388 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele32g1158 | 174 | 431 | C3H Transcription Factor Family | AT2G41980 | 79.457 | 4.13e-159 | 449 |