Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1155 ATGGTCATGCGCCGCAAGGAAATCAAAGACTATGGCACTGCTAAAGCCATTGAAGGTGATTTCAGGGCTGGCCAAAGTTGCTTAATCATTGAGGGTTTAGTTACCAGTGGCACTTCGATATTAGAAACCGCTGCGCCCCAGAGTGCTGCAGGGTTAAAGGTTAGTGAGGCTGTTGTTTTGATTGATAGAGAGCAAGAATGGAGAGAGAATTTGGAGGAGAATGGGATCAGGCTACATTCGATCGTTAAATTGGCTGAAATGGTAAACATTTTGAGGGAAAAGGGGAAACTTGAGAAGGATATGATAGAGGTTGTTATGAAATTCTTGGAGGAGAATCAGAGGGTTGCTTCATCGGCAAAATTAGCCAAGCCTAAGAGGGTCAAGGCGTTGTCATTAAGGGAAAGGGCAAAGTTGTCTAAGATTCCAACTGGAAAGCGGTTGTTTGAGATAATGGCTGAGAAGGAGAGTAATCTTTGTTTGGCTGCAGATGTTGGAACTGGAGCTGAATTGCTTGAAATTGCAGGAAAGGTTGGGCCTGAGATATGTATGCTGAAAACTCATGTGGATATTTTGCCAGATTTTACTTCTGATTTTGGTTCTAAGCTTCGCAAGGGTACATCATGTCTGTTAAATTTTGAGGAATCTGATGAATTATTGTATATGTCCAATGTTGCTTTATTTTATGTACTGCTCATTACCTATGTTAAGAGTGTTATTGCAGAGAAACATAATTTCCTAGTCTTTGAGGATCGTAAACTTGTTGACATCGTTAACACAGTTACTATGTTATATGAAGGGAGACGCTTTGACCTATCCTGGACCCCTTTTCATTTCTCTTCCATTTCTGGCAACCTTGCCACTGGAGATTATACAGCTGCAGCAGTGAGAGTTGCTGAGGAGCATCCGGATTTTGTGATTGGCTTTATTTCAGTCAATCCAGCATCATGGCCAGGGAAACCGGTAAATCCGTCTTTCATTCATGCAACTCCTGGAGTTCAAATGGTGACTGATGGTGATGCATTAGGGCAGCAATATAACACTCCATATTCTGTGATATATGGTAAGGGAAGTGACATAATAATTGTTGGTCGTGGCATCATAAAAGCGGCAAATCCGGCAAAGGCAGGTCATGTATATCGACTTGAAGGATGGAAAACTTATTTGGCCAAGTGCACTTCAGACTTCTTCTATTTCATGACTTTCTACACTAGCAGTATTTACACTAGTTTTCCAACTGGTATTAAAAGGCATTTTTAA 1257 0.4121 MVMRRKEIKDYGTAKAIEGDFRAGQSCLIIEGLVTSGTSILETAAPQSAAGLKVSEAVVLIDREQEWRENLEENGIRLHSIVKLAEMVNILREKGKLEKDMIEVVMKFLEENQRVASSAKLAKPKRVKALSLRERAKLSKIPTGKRLFEIMAEKESNLCLAADVGTGAELLEIAGKVGPEICMLKTHVDILPDFTSDFGSKLRKGTSCLLNFEESDELLYMSNVALFYVLLITYVKSVIAEKHNFLVFEDRKLVDIVNTVTMLYEGRRFDLSWTPFHFSSISGNLATGDYTAAAVRVAEEHPDFVIGFISVNPASWPGKPVNPSFIHATPGVQMVTDGDALGQQYNTPYSVIYGKGSDIIIVGRGIIKAANPAKAGHVYRLEGWKTYLAKCTSDFFYFMTFYTSSIYTSFPTGIKRHF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1155 418 SUPERFAMILY PRTase-like 1 107 IPR029057 -
Lele32g1155 418 Gene3D Aldolase class I 222 277 IPR013785 -
Lele32g1155 418 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 156 197 IPR001754 GO:0004590|GO:0006207
Lele32g1155 418 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 280 376 IPR001754 GO:0004590|GO:0006207
Lele32g1155 418 Gene3D Aldolase class I 278 394 IPR013785 -
Lele32g1155 418 Gene3D Aldolase class I 128 213 IPR013785 -
Lele32g1155 418 SUPERFAMILY Ribulose-phoshate binding barrel 154 380 IPR011060 -
Lele32g1155 418 SMART OMPdecase_2 157 379 IPR001754 GO:0004590|GO:0006207
Lele32g1155 418 Gene3D - 1 125 IPR029057 -
Lele32g1155 418 CDD PRTases_typeI 1 83 IPR000836 -
Lele32g1155 418 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 239 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1155 Lele-ChrLele32 11750259 11754884 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1309 29 19693263 19696782 Lele32g1155 32 11750259 11754884 hybridization