Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1135 ATGAAAGTCCCCTGCTGTTCGGTTTGCCAAACACGGTATAACGAAGAAGAGCGAGTCCCACTTCTGCTCCAATGTGGGCATGGGTTTTGCAGAGAGTGTCTCTCAAGAATGTTCTCGACTTCTCCAGATACGACGCTAGCTTGTCCGAGGTGTCGCCATGCGTCAATCGTCGGGAACTCTGTGCAGGCTCTGCGCAAGAACTACGCCGTGCTTGCCCTTATTCACTCGGCTTCGAATGCTTCGGATTCGAATTTCGATTGTGACTTCACAGATGAGGATGAAGAAGGGGTTGATGGGGGTGAAGAAGATGGAGGCAATGATGACGACTCGGTCATGCGCCGTCGGTGTAGCCGTGGTTCCCAAACATCAAGCTCTGGCGGCTGTGGACCGGTTATAGAGGTTGGACTGCACCAAGAATTGAAATTTCTGCGTCGGCTAGGAGAGGGGAGGAGGGCTGGCATGGAAATGTGGACAGCGGTAATTGGTGGGGGTGGTGGAAATGGACGGTGCCGACATCAAGTGGCGGTGAAGAAGGTTACGATAATGGAGGAGATGGATTTGGATTGGATACAGGGGCAGCTTGAGAATCTGCGTCGTGCTTCTATGTGGTGTAGGAATATATGTACATTTCATGGGGCATTGAAGATGGAGGAGAGTTTGTGTCTTGTGAAGGATCGGTGTTATGGATCAGTTCAGTCGGAGATGCAGCGCAACGAGGGCAGACTTACTTTGGATCAAGTCTTAAGATATGGGGCAGACATTGCTAGAGGGGTGGCTGAGCTTCATGCTGCTGGTATTGTTTGCATGAATCTCAAACCATCCAATCTTCTTCTTGATGCAAATGGTAGAGCGGTGATTTCAGATTATGGACTTGCTACAATTTTGAAGAAGCCTTCCTGTCGGAAAGCCCGACCAGAATGTGATAACTCCTCAAAGATCCATTCCTGCATGGAGTGTATAATGCTCAGCCCACATTACGCAGCTCCAGAGGCTTGGGAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGCAATAGGTATATCTGCAGAGTCGGATGCCTGGAGTTTTGGTTGTACATTGGTGGAAATGTGCACGGGTTCTGTTCCTTGGTCTGGTTTAAGTGCAGAAGAAATCTATAGAGCAGTTGTCAAGGGAAAGAAACTGCCACCACAGTATGCTAGTGTGGTTGGTGGTGGAATACCAAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAACCAGCCAAAAGGCCTAGTTTTAATGCAATGTTGGCAATATTTCTTCGTCATTTGCAGGAAATACCACGCAGTCCTCCTGCAAGCCCTGATAATGACTTTTTTCAACCATCTGTGTCAAATGCGGTAGAGCCTTCCCCACTACCTGAGCCAGAAGTTCCACGAGAAAATCCGAACCATCTTCACCGACTTGTGTCTGAAGGGGATGTTAGAGGTGTTAGAGATCTTCTTACAAAGGCTGCATCAGAAAGTGGTAGCAACTACCTATCTTCTTTATTGGAAGCTCAAAATGCTGATGGGCAAACTGCTCTTCATCTAGCTTGTAGATGGGGTAGTGCAGAACTTGTTGAAGCTATTTTGGAGTATAGAGAGGCAAATGTAGATGTCTTGGACAAAGATGGAGATCCTCCCCTTGTTTTTGCATTAGCAGCTGGATCTCCAGAATGTGTCCATAGTCTTATAAAAAGAAATGCTAATGTAAGGTCTCGGTTGAGAGATGGCTTTGGCCCTTCTGTTGCCCATGTTTGTGCTTATCATGGACAGCCAGATTGCATGCGAGAATTACTGTTGGCTGGAGCGGATCCTAACGCAGTGGATGATGAAGGAGAAACTGTACTGCATAGAGCAGTTTCCAAGAAGTACACAGACTGTGCTATTGTGATATTGGAAAATGGAGGCTGCAGATCAATGGGCATATTAAATTCGAAGAATCTGACACCACTGCACTTGTCTGTGGCAACATGGAATGTGGCTGTTGTAAAAAGATGGGTGGAAGTCGCAACTTCTGATGAGATTGTTGAGGCAATTGACATTCCAAACCCTATAGGCACTGCACTGTGCATGGCAGCTGCTTCTAAGAAAGACCATGAAATTGTTCTGGATCCTAACAAAAGGAACACCTTTGATTTGGCGAACTTGATGGGTTTAAAAAGATTTCAAAGGAGAAAGTGGCTAAAGTACCATAGCAATTTCCAGTATTTGCAGTGTATCTTTGTCTTTAGGGATTGTGAAGATGAAGATTTCCTTTGGAGTGAGAAAGAAAGTGGTAAACTCCATGTTCTCAATGTAGTTGGATCTGGAGCAGATCCATCTGCCCAAGATACGCAGAATGGGCGGACAGCTTTGCATACAGCTGCTATGACTAATGATGTTGAGTTGGTCAAGGTTGTTCTTGCTGCTGGTGTCAATGTGAACATCCGCAATGTGCACAACAGTATACCTCTTCACTTAGCTCTAGCTAGGGGGGCAAAGTCATGTGTTGGATTGCTTCTATCTGCTGGGGCTGATTATAATTTGCAGGATGATGATGGTGACAATTCTTTCCATATAGCAGCAGAAACAGCAAAAATGATTCGTGAAAATCTTGATTGGCTTATTGTGATGCTAAGAAATCCTGATGCTGATGTTGAAGTGAGAAACCACAGGCAAGTAGTCATGAACACTTTTCCCTTTTCATTTTATATGCATATATGCCTCGATAGCAAGACACTACGTGATATCTTAGAGGGCCTTCCTCGAGAATGGATATCTGAAGATTTGATGGAGGCACTAGCCAATAGAGGTGTTCATCTATCTTCTACAATGTATGGGAAATTTGAAGTGGGAGATTGGGTGAAGTTTAAAAGAACTGTCACAACTCCAATATATGGGTGGCAGGGTGCTAGACAAATGAGTGTTGGCTTTGTGCAAAGTGTTCCTGACAGGGAGAATCTCATTGTGTCCTTTTGTTCTGGAGAGGCTCGTGTTTTGGCAAGTGAAGTTGTGAAAGTCATTCCATTAGACAGGGGCCAACATGTACAGCTCAAAGCAGATGTGAAAGAGCCCAGTGTGCAAGCCACAAACCTACAAACTACTACTATTGAGAGGGTATCATCTACTTGCATACTTCATCTCCTTGGAAAAGAACGGAAGAAGACAGAAATTATGAAAATTCTGTCTGAGTTTGGTTGGCGTGGACAGTCACATGACAGTGTTGGCACAGTTTTATGCGTTGATGATGATGGGATACTCCGTGTAGGGTTTCCTGGAGCATCCAGAGGGTGGAAAGCTGACCCATCCGAGATGGAACGGGTTGAGGAGTTCAAGGTTGGAGATTGGGTTCGTATTCGCCCCACTCTTACATCTGCAAAGCATGGATTAGGGTCTGTGACACCAGGAAGCATTGGTATAGTATATTGTATTAGACCAGACAGTAGTCTGTTAATTGAACTGAGCTATCTGCCACATCCATGGCATTGTGAACCAGAAGAGGTTGAGCATGTTGCTCCTTTTAGGATTGCTGATCGCGTTTGTGTGAAGCGATCTGTTGCGGAACCTAGATATGCTTGGGCTGGCGAGACACATCATAGTGTCGGAAGAATAAGTGAGATAGAAAATGATGGTTTATTAATAATTGATATACCAAATCGACCCATACCATGGCAGGCTGATCCATCTGACATGGAGAAGGTGGAAGATTTCAAGGTTGGAGATTGGGTCAGAGTGAAAGCTTCCGTGTCTTCTCCAAAGTATGGATGGGAGGATATTACAAAGAGCAGTATAGGGATAATTCATAGCTTGGAGGAGGATGGGGATATGGATATTGCCTTTTGCTTCAGGAGCAAGCCTTTCTGTTGCTCTGTCACTGATGTGGAGAAGGTTCCCCCTTTTGAGGTGGGACAAGAGATTCATGTGATGCCATCTGTTACTCAGCCTCGGCTTGGATGGTCAAATGAATCACCAGCTTCTGTTGGAAAAATAGTGAGAATTGACATGGATGGTGCTCTAAATGTGAGAGTCACTGGCAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGACTCCCTGGATTTGAAGTTGGTGATTGGGTACGCTCAAAACCAAGCCTGGGAACCAGACCAAGTTATGACTGGAATAGTGTTGGAAAAGAAAGTATAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTGGCTTGCTGTTTTCGTAAAGGGAAGTGGATCACTCACTATACAGATGTTGAAAAGGTTCCCTGCTTGAAAGTTGGGCAGTATGTTAGGTTCAGAACTGGTTTGGTCGAACCAAGATGGGGCTGGAGAGGAGCTCTACCTGAATCACGAGGTGTTATAACCACTATACATGCCTATGGAGAAGTGAGGGTGGCATTCTTTGGGTTGCCAGGTTTGTGGAGAGGAGATCCTGTGGACCTTGAGATTGAGCACATGTTTGAAGTTGGAGAGTGGGTGAAGTTGAAAGATAATGCCGATGATTGGAAATCTGTTGGACCGGGTAGCATTGGCGTTGTACAAGGAATTGGTTATGAAGGTGATATATGGGATGGAAACATTCATGTTGGCTTTTGTGGGGAGCAAGAAAGGTGGGTAGGACCAACTTCCGATTTTGAAAGAGTTGAGAAACTCATTGTTGGACAAAAGGTTAGAGTTAAACAAACTGTAAAGCAGCCAAGATTTGGGTGGTCTGGACACACCCATGCTAGTATTGGAACCATATCAGCTATCGACGCTGATGGAAAGCTTCGAATATACACTCCTGCAGGATCGAAAGCATGGATGCTGGACCCATCAGAAGTAGATTTGGTAGAAGAGGAGGAGCTCCGGGTTGGAGACTGGGTCAAGGTTAGATCATCGGTTTCAACCCCAACCTACCAATTGGGAGAAGTGAACCATTCAAGCATAGGGGTTGTGCATCGCATGGAAGATGATGATCTGTGGGTGGCATTCTGTTTCACTGAAAGGCTGTGGCTTTGCAAGGCATGGGAAATGGAAAGAGTTAGACCATTTAAAGTGGGTGATAAAGTAAAGATACGAGATGGATTGGTATCGCCCCGGTGGGGATGGGGAATGGAGACACATGCTAGCAAGGGACAGGTGATTGGAGTAGATTCAAATGGTAAGCTAAGAATTAAGTTCCGATGGCGGGAAGGGAGGCCCTGGATAGGAGACCCTGCCGATATCGTTCTTGATGAGAATTGA 5232 0.4551 MKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSTSPDTTLACPRCRHASIVGNSVQALRKNYAVLALIHSASNASDSNFDCDFTDEDEEGVDGGEEDGGNDDDSVMRRRCSRGSQTSSSGGCGPVIEVGLHQELKFLRRLGEGRRAGMEMWTAVIGGGGGNGRCRHQVAVKKVTIMEEMDLDWIQGQLENLRRASMWCRNICTFHGALKMEESLCLVKDRCYGSVQSEMQRNEGRLTLDQVLRYGADIARGVAELHAAGIVCMNLKPSNLLLDANGRAVISDYGLATILKKPSCRKARPECDNSSKIHSCMECIMLSPHYAAPEAWEPVKKSLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWSGLSAEEIYRAVVKGKKLPPQYASVVGGGIPRELWKMIGECLQFKPAKRPSFNAMLAIFLRHLQEIPRSPPASPDNDFFQPSVSNAVEPSPLPEPEVPRENPNHLHRLVSEGDVRGVRDLLTKAASESGSNYLSSLLEAQNADGQTALHLACRWGSAELVEAILEYREANVDVLDKDGDPPLVFALAAGSPECVHSLIKRNANVRSRLRDGFGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGETVLHRAVSKKYTDCAIVILENGGCRSMGILNSKNLTPLHLSVATWNVAVVKRWVEVATSDEIVEAIDIPNPIGTALCMAAASKKDHEIVLDPNKRNTFDLANLMGLKRFQRRKWLKYHSNFQYLQCIFVFRDCEDEDFLWSEKESGKLHVLNVVGSGADPSAQDTQNGRTALHTAAMTNDVELVKVVLAAGVNVNIRNVHNSIPLHLALARGAKSCVGLLLSAGADYNLQDDDGDNSFHIAAETAKMIRENLDWLIVMLRNPDADVEVRNHRQVVMNTFPFSFYMHICLDSKTLRDILEGLPREWISEDLMEALANRGVHLSSTMYGKFEVGDWVKFKRTVTTPIYGWQGARQMSVGFVQSVPDRENLIVSFCSGEARVLASEVVKVIPLDRGQHVQLKADVKEPSVQATNLQTTTIERVSSTCILHLLGKERKKTEIMKILSEFGWRGQSHDSVGTVLCVDDDGILRVGFPGASRGWKADPSEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPHPWHCEPEEVEHVAPFRIADRVCVKRSVAEPRYAWAGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITKSSIGIIHSLEEDGDMDIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSNESPASVGKIVRIDMDGALNVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGTRPSYDWNSVGKESIAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPCLKVGQYVRFRTGLVEPRWGWRGALPESRGVITTIHAYGEVRVAFFGLPGLWRGDPVDLEIEHMFEVGEWVKLKDNADDWKSVGPGSIGVVQGIGYEGDIWDGNIHVGFCGEQERWVGPTSDFERVEKLIVGQKVRVKQTVKQPRFGWSGHTHASIGTISAIDADGKLRIYTPAGSKAWMLDPSEVDLVEEEELRVGDWVKVRSSVSTPTYQLGEVNHSSIGVVHRMEDDDLWVAFCFTERLWLCKAWEMERVRPFKVGDKVKIRDGLVSPRWGWGMETHASKGQVIGVDSNGKLRIKFRWREGRPWIGDPADIVLDEN 1743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1135 1743 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Lele32g1135 1743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 86 IPR013083 -
Lele32g1135 1743 ProSiteProfiles Ankyrin repeat profile. 819 851 IPR002110 GO:0005515
Lele32g1135 1743 Pfam Ankyrin repeats (many copies) 587 636 IPR002110 GO:0005515
Lele32g1135 1743 CDD RING-HC_ScPSH1_like 5 52 - -
Lele32g1135 1743 Pfam Mind bomb SH3 repeat domain 1110 1230 IPR040847 -
Lele32g1135 1743 Pfam Mind bomb SH3 repeat domain 1489 1610 IPR040847 -
Lele32g1135 1743 Pfam Mind bomb SH3 repeat domain 948 1104 IPR040847 -
Lele32g1135 1743 Pfam Mind bomb SH3 repeat domain 1236 1354 IPR040847 -
Lele32g1135 1743 Pfam Mind bomb SH3 repeat domain 1362 1483 IPR040847 -
Lele32g1135 1743 Pfam Mind bomb SH3 repeat domain 1618 1737 IPR040847 -
Lele32g1135 1743 ProSiteProfiles Ankyrin repeat profile. 786 818 IPR002110 GO:0005515
Lele32g1135 1743 FunFam E3 ubiquitin-protein ligase KEG 455 685 - -
Lele32g1135 1743 PRINTS Ankyrin repeat signature 835 849 IPR002110 GO:0005515
Lele32g1135 1743 PRINTS Ankyrin repeat signature 516 531 IPR002110 GO:0005515
Lele32g1135 1743 MobiDBLite consensus disorder prediction 91 105 - -
Lele32g1135 1743 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lele32g1135 1743 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Lele32g1135 1743 Gene3D Transferase(Phosphotransferase) domain 1 227 447 - -
Lele32g1135 1743 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1742 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lele32g1135 1743 Pfam Protein kinase domain 171 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1135 1743 ProSiteProfiles Ankyrin repeat region circular profile. 819 851 - -
Lele32g1135 1743 FunFam E3 ubiquitin-protein ligase KEG 228 445 - -
Lele32g1135 1743 ProSiteProfiles Ankyrin repeat profile. 515 548 IPR002110 GO:0005515
Lele32g1135 1743 Gene3D - 767 911 IPR036770 -
Lele32g1135 1743 MobiDBLite consensus disorder prediction 442 474 - -
Lele32g1135 1743 ProSiteProfiles Ankyrin repeat region circular profile. 786 817 - -
Lele32g1135 1743 SUPERFAMILY Protein kinase-like (PK-like) 172 446 IPR011009 -
Lele32g1135 1743 ProSiteProfiles Protein kinase domain profile. 140 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1135 1743 Pfam Ring finger domain 6 52 IPR001841 -
Lele32g1135 1743 MobiDBLite consensus disorder prediction 91 129 - -
Lele32g1135 1743 Pfam Ankyrin repeats (3 copies) 771 850 IPR002110 GO:0005515
Lele32g1135 1743 Pfam Ankyrin repeats (3 copies) 496 577 IPR002110 GO:0005515
Lele32g1135 1743 ProSiteProfiles Ankyrin repeat region circular profile. 515 537 - -
Lele32g1135 1743 Gene3D - 464 724 IPR036770 -
Lele32g1135 1743 SUPERFAMILY RING/U-box 5 57 - -
Lele32g1135 1743 SMART ring_2 6 51 IPR001841 -
Lele32g1135 1743 SUPERFAMILY Ankyrin repeat 477 863 IPR036770 -
Lele32g1135 1743 SMART ANK_2a 515 545 IPR002110 GO:0005515
Lele32g1135 1743 SMART ANK_2a 584 613 IPR002110 GO:0005515
Lele32g1135 1743 SMART ANK_2a 819 848 IPR002110 GO:0005515
Lele32g1135 1743 SMART ANK_2a 852 887 IPR002110 GO:0005515
Lele32g1135 1743 SMART ANK_2a 786 815 IPR002110 GO:0005515
Lele32g1135 1743 SMART ANK_2a 549 578 IPR002110 GO:0005515
Lele32g1135 1743 SMART ANK_2a 652 681 IPR002110 GO:0005515
Lele32g1135 1743 SMART ANK_2a 617 648 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1135 Lele-ChrLele32 11364646 11384369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1135 148 428 MAP Kinase Kinase Kinase AT4G08500 26.132 1.89e-16 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lele32g1135 Pkinase 7e-29 CL0016