Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1133 ATGGATGAACTGGGAGAATTTGGGGAGAGGCCTATTTTCAGAGATATAAGACGCTATTTCTGTGAATACTGTGGCATCTGTCGATCCAAAAAGACCCTGATTACCTCTCACATCAATTCTTGCCACAAGGAGGAGTTGGAAAGAGCCAGAGTTGAGAAAGATCAGGAATCCGGGAGCATAAAATCCAATACTTGCAAGGAGTGTGGTGCTAGTTTCAAAAAACCAGCCCATTTGGTGCAGCACATGCTAGGTCATTCTCTCGAGGAAAGATATTTATACTATCAGAAATTTATGGATATTGTAGCGTGA 309 0.4207 MDELGEFGERPIFRDIRRYFCEYCGICRSKKTLITSHINSCHKEELERARVEKDQESGSIKSNTCKECGASFKKPAHLVQHMLGHSLEERYLYYQKFMDIVA 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1133 102 FunFam Zinc finger 45-like 61 86 - -
Lele32g1133 102 SMART c2h2final6 63 85 IPR013087 -
Lele32g1133 102 SMART c2h2final6 19 42 IPR013087 -
Lele32g1133 102 Pfam Zinc finger, C2H2 type 64 85 IPR013087 -
Lele32g1133 102 Gene3D Classic Zinc Finger 9 92 - -
Lele32g1133 102 SUPERFAMILY beta-beta-alpha zinc fingers 61 91 IPR036236 -
Lele32g1133 102 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Lele32g1133 102 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1133 Lele-ChrLele32 11343480 11344765 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele32g1133 zf-C2H2 2.8e-05 CL0361