Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1124 ATGGAACTCGGGTCCTACCCCGCCCGCCCCTCCTGGGATGCCCCTGTAAGTAGAAGGAACCGGCATCACAAATCTGTTGGAAGTAATAGCTCTTCAGATGATGGCACCAGTGATAGGGGTAAAAAATCTGGTATAGGAGCTGATGGTATTGCTGGAATAATGATTTTCATCCCTCTTGTGGAGGGCAATAGTTGGCTAGTTGCTTTGTTTTTGTTGAAAAGAAAATCCAGGAAGTGCATTTTGCTCCGCTTAATTCAAACGAAGTGCATGGTATTGAATCGTAATGCTGGATCTAGGTATGATGCACCTGAAGTTGCCTTGTCTGATCAATATACTTTGAAGAGTGATGTTTATAGCTTTGGAGTTGATATGTTGGGGCTTCTTAGTGGACTAAAACCATTCCATTGGTCAAAATTAAAGAAAGAAAGGTTCTTGAGGCCCCAATAA 447 0.4273 MELGSYPARPSWDAPVSRRNRHHKSVGSNSSSDDGTSDRGKKSGIGADGIAGIMIFIPLVEGNSWLVALFLLKRKSRKCILLRLIQTKCMVLNRNAGSRYDAPEVALSDQYTLKSDVYSFGVDMLGLLSGLKPFHWSKLKKERFLRPQ 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1124 148 Gene3D Transferase(Phosphotransferase) domain 1 17 147 - -
Lele32g1124 148 Pfam Protein tyrosine and serine/threonine kinase 97 136 IPR001245 GO:0004672|GO:0006468
Lele32g1124 148 MobiDBLite consensus disorder prediction 1 42 - -
Lele32g1124 148 SUPERFAMILY Protein kinase-like (PK-like) 97 137 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1124 Lele-ChrLele32 11116428 11117376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1124 81 145 Strubbelig Receptor Gene Family AT3G14350 49.231 7.41e-12 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele32g1124 PK_Tyr_Ser-Thr 2.2e-05 CL0016