Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1116 ATGAGCATGTTAGGCCTGCGAGACCTACTTCTCATAGCTCCAAATCCTTCTTCTCTTCACCAGCAGCAGCAGCAGCAACAACAACATCAACCCCAACAACAGGACCATTCGAACCTTCATCATCTTCCTTCTTCTGCTTCACTCAGCGTCGGTCTCCGCATTTTCCCTCTCCTCACTGCCGCTCCTTGCGTCCCCAATGACCTCCCTCATGATTCCGCCGATCACAATCATCATCAGAATACTGCCAACAATTCCAATTTCTGGAACCTCAAGATGTGTCCGGCGGAAGTTGGGAATTCTGCTAAGAAAGGAGTGATCGATGTTGAAGGTGATGAGAATGGGATTTTTGGGGGTGATTTTAGGGTCTGTCAGGATTGTGGGAATCGCGCCAAGAAAGATTGTGGCTATAGACGATGCAGGACTTGTTGTAAGGGACGTGGGTACGATTGTAGCACTCATCTCAAGAGCACGTGGGTCCCTGCCGCTCGCCGCCGCGAGCGTCAGATGACAGTTGTTGCTGCGGCCGGAGCTGCTGCTGGTGGTGCTTCTGGGTCGCCTCCCGGTTCTAAGAGGCCTAGACCGTTCGGGTCTTCACAGAATGCCGCTACCACTTCTCATAGTTCTGCCTCTAACGCTACTACGCCAAGAAGTCTAGATACTAGCTCGTGTCACCAAGATGCTAGTTTCAAGCAGTCTTTACCTGGTCATGTTCGTGCTCCTGCGGTGTTCAGGTGCCATAGAGTTTCGGCTATTGGTAATGGGGAAGATGAGTTTGCGTACATGGCCACAGTTCATATCAGTGGCCACATTTTCAAGGGTTTTCTGTATGATCACGGTGCTGATGGGAAAAGCGCAATCCCATGTGTTTCTGAACTTCAGCTGGGAAATTATAGCAGTGAAAAGAATAGGGAATGCTCTTCTCCAATTGGCGTTCCAACTAATAATAATAATAATGCCTACCCTGCTTCTGGCTGTTGA 978 0.4969 MSMLGLRDLLLIAPNPSSLHQQQQQQQQHQPQQQDHSNLHHLPSSASLSVGLRIFPLLTAAPCVPNDLPHDSADHNHHQNTANNSNFWNLKMCPAEVGNSAKKGVIDVEGDENGIFGGDFRVCQDCGNRAKKDCGYRRCRTCCKGRGYDCSTHLKSTWVPAARRRERQMTVVAAAGAAAGGASGSPPGSKRPRPFGSSQNAATTSHSSASNATTPRSLDTSSCHQDASFKQSLPGHVRAPAVFRCHRVSAIGNGEDEFAYMATVHISGHIFKGFLYDHGADGKSAIPCVSELQLGNYSSEKNRECSSPIGVPTNNNNNAYPASGC 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1116 325 MobiDBLite consensus disorder prediction 176 225 - -
Lele32g1116 325 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 122 164 IPR006510 -
Lele32g1116 325 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 20 310 IPR007818 GO:0003700|GO:0006355
Lele32g1116 325 Pfam Domain of unknown function (DUF702) 122 281 - -
Lele32g1116 325 MobiDBLite consensus disorder prediction 192 225 - -
Lele32g1116 325 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 233 279 IPR006511 -
Lele32g1116 325 MobiDBLite consensus disorder prediction 17 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1116 Lele-ChrLele32 10930263 10931653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1116 1 314 C2H2 Transcription Factor Family AT5G12330 40.491 1.15e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele32g1116 DUF702 8.2e-57 No_clan