Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1103 ATGGCTGCAGAACCTCAGAGGATGGTGGTGATAACAGATGCATCAAAAGATGTTTGTGCAAATGCCATAAAGAAGGCCATGACACATGTATGCCCTCAACCAGGAGATGTGCTTACCCTCATAGGATATCTTGATCACTTCCTTCATCCCCTGGGATGTATGATGGAATTCCACATTGATGGTTTTGCACGCCCTTTCATAGAGGTCGCTTCTTATGCTGCCAGAAGTTTAGGGGCAACATGGTTGATTGTCGATAGACATGTGAACAAATACGAGAGGCCATTTGACAAGCTACCTTGTGGTTTGTATAGAATAAGAAATGACAATTCCATTGAGAAGCTGAGAGATCCAGAAGTAATAACAAAGTGCTCCAAATCAGTTACTGCAAGGAAAGATACGAAGATGATAGCAGGAAACCCATCCGAAGATGTTTCTTCCCAGAAAACAGGGCATAGATTATCAGCAAGTGAACATTTCGCATCAACTGGAACATCAAGTTCAAGCCTGCATGAGTTTATGAAAGACAGCAAGCAAGATGTTCAAAATATAGAATTTATGAACCCACTCTGTTCTGTTTGTAAAAGTGAACGACCGAAAGTTGGATGGAAGAAAGACTTCCGTTACACAGAACTCTGGAAAGCTACACAGGGATTCTCCCCAAAGAACTTTTTATCAGAGGGTGGCTTTGGATCTGTCTATAGAGCAGAGCTCAATGGAATAACAGTTGCTGTTAAGAAACTTAATAGTGTAAGTTCCCGTGGAGAAAAAGAATTCAATTCTGAAGTCAGTTTACTTAGTAGAGCAAGACATGAGAATGTGGTCATGCTTCTGGGATCCTGCTCAGAAGGAAAGCGTAGGCTTCTTGTTTATGAATATGTCTGCAACGGTTCACTTGACCAACATTTGTCACAACACTCTCGGTTCCCTCTTAGTTGGGAAGAGAGAATCAAAGTTGCTATTGGAGTTGCAAAGGGACTGCAATATTTGCATGAGAATGACATTATACACAAAGATGTGGTAAATGCATTGAGTTGCCTAGTCGAATGGAGCACCTGCAGCTCATCATCAGACTCTGATGAATCAGAAGGTGAAATCATTAAGAAGAATTTGAATTAG 1116 0.4122 MAAEPQRMVVITDASKDVCANAIKKAMTHVCPQPGDVLTLIGYLDHFLHPLGCMMEFHIDGFARPFIEVASYAARSLGATWLIVDRHVNKYERPFDKLPCGLYRIRNDNSIEKLRDPEVITKCSKSVTARKDTKMIAGNPSEDVSSQKTGHRLSASEHFASTGTSSSSLHEFMKDSKQDVQNIEFMNPLCSVCKSERPKVGWKKDFRYTELWKATQGFSPKNFLSEGGFGSVYRAELNGITVAVKKLNSVSSRGEKEFNSEVSLLSRARHENVVMLLGSCSEGKRRLLVYEYVCNGSLDQHLSQHSRFPLSWEERIKVAIGVAKGLQYLHENDIIHKDVVNALSCLVEWSTCSSSSDSDESEGEIIKKNLN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1103 371 FunFam Proline-rich receptor-like protein kinase PERK8 181 292 - -
Lele32g1103 371 ProSiteProfiles Protein kinase domain profile. 218 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1103 371 Gene3D Phosphorylase Kinase; domain 1 191 292 - -
Lele32g1103 371 Gene3D Transferase(Phosphotransferase) domain 1 294 347 - -
Lele32g1103 371 PANTHER OS01G0253100 PROTEIN 145 339 IPR045271 -
Lele32g1103 371 Pfam Protein tyrosine and serine/threonine kinase 222 348 IPR001245 GO:0004672|GO:0006468
Lele32g1103 371 SUPERFAMILY Protein kinase-like (PK-like) 194 339 IPR011009 -
Lele32g1103 371 MobiDBLite consensus disorder prediction 352 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1103 Lele-ChrLele32 10231400 10237838 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1103 206 342 Trihelix Transcription Factor Family AT1G23540 48.227 1.22e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele32g1103 PK_Tyr_Ser-Thr 2.2e-28 CL0016