Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1098 ATGGCAGAAGAAATTCAGAGAGTAGTGGTGATAGTGGAAGCATCAAAAGATGTTTCAGCAAAACCCATACTGAAGGCCCTGGAAAGGACACGTCCTCAGGGTGGAGATGAGCTTAAACTCATAGCTGTTCTTGAACAGTTCAGCAGTCCCTTGGGATACAAGATCAGGGTCCATGGCAGTCCATTTCTTGCAACACGCCAAAAATATGTTGACGATGAATTAGCTAGAAAAAGGGATGAATTTAAAAAGAGTTCAGAAGTCATGAAAATCTCTGGGTATTGTGAAACAAGAAAGATGGATTTCCACGTTGATGTGGTTGCACACCCTTTCATAGAGGTTGCTTCTGATGCTGCCAAAAGTTATGGAGCAACATGGTTGATCGTTGATAGACGTGTGGACAAAGATAACAAGAAATTGCGGTTACCTTGTGGCATGTTTAGAATAAAAAGTGACAACACTATTGAAAAGTTGTCGGATCCAGAAGTGACAAGAGAGAATTCCAAATCACATTCCTCAAGTCAAGCTATGACAACCATTCCAGGAAACCCAGATAAAGAAATTTCACCCAAGAGGCATAGATCGTCACCAAGTGAACAGTTTACATCAATTGGAACATCAAGTTCAAGCAGTCTTCAGTTAATGAATGACAATGAGCAGGCAGAAGCTCAAAATATAGAACAAGAAAAAGAAAGGATATTTTTAATCTCTGGACACCATGAGCAGCAAAGAGGTGATAATGAAGAGTCTCAGATGGAGACGGAATTTACAAACCCACTTTGTTCAGTGTGTAAAAATAAACGACCAAAAGTTGGGTGGATGAAAGACTTCAGTTACACAGAACTCTGGAAAGCTACACAGGGATTCGCCCAAAAGAACTTTCTATCAGAGGGTGGATTTGGAGCTGTCTACAAAGCAGAGCTCAGTGGAATAACTATTGCTGTTAAGAAACTTAAAAATGCAAGTGTCCAAGGAGAGAAAGAATTCAAATCTGAAGTCAAATTACTTAGCAGAGCAAGGCATGAGAATGTGGTCACGCTTATGGGGTCCTGCTCAGAAGGAAAGCATAGACTTCTTGTTTATGAATATGTCTGCAATGGTTCATTGGACCAACATTTATCACAACACTCTCGAATTCCTCTTACTTGGGAAGAGAGGATCAAAGTTGCTATTGGAGTTTCAAAGGGCTTGCAATACTTGCATGAGAACAACATTATACACAGAGATGTGAGACCAAATAATATCCTTCTCACACATGATCGTCAAACTCTGCTGGGAGACTTTGGTTTGGCGAGAAATCAGCATGAAGACTCAATCCAGTCAACAGAGGTTATTGGAACTTTAGGGTATTTGGCACCTGAATATGCAGAATACGGGAAAGTTTCAGCCAAGATAGATGTATATTCTTTTGGGGTGGTTCTGCTAGAACTCATCACAGGAATGAGGACAACAGACAAAAGACTTAAAGGAAAAAGTCTAGTTGGATGGGCAAGACCACTACTAAAAGACCGGAAATATCACGATCTAATTGATGAAAGGATCACCAATTCTCATGATTTTCATCAACTATTTTGGATGGTTCGAATAACAGAAAAATGTCTAACTAGGGATCCTCAGAAACGACTAAATATGGTTGCAGTGGTTAATGTTTTAAGTCGCATATTGGAAGGCTACACATGTATCATACCAAGAGACCATTCCCCAACAAGGTCAGAGTCATCTTATAGCTCATTAGACTCTGATGAATCAGAAGATGACGATGAAGAAGCCTTTGAATCAGAATAGGACTCCCGCACTGTGTCCAATTGTGAGAACTCCTTGAAGCCAGATTATTTGAAGACTCCCACTTTCATCTCCAATTGTGAGAACTTGAAGCCAGATTATTGGAAAACTCCCACCATCACCTCCAATTGTGAGAACTTGATGCCGGATTATTGGACGACACCTGCATTGCCTCCCATTTTGAGAACTTTTTGA 1974 0.4043 MAEEIQRVVVIVEASKDVSAKPILKALERTRPQGGDELKLIAVLEQFSSPLGYKIRVHGSPFLATRQKYVDDELARKRDEFKKSSEVMKISGYCETRKMDFHVDVVAHPFIEVASDAAKSYGATWLIVDRRVDKDNKKLRLPCGMFRIKSDNTIEKLSDPEVTRENSKSHSSSQAMTTIPGNPDKEISPKRHRSSPSEQFTSIGTSSSSSLQLMNDNEQAEAQNIEQEKERIFLISGHHEQQRGDNEESQMETEFTNPLCSVCKNKRPKVGWMKDFSYTELWKATQGFAQKNFLSEGGFGAVYKAELSGITIAVKKLKNASVQGEKEFKSEVKLLSRARHENVVTLMGSCSEGKHRLLVYEYVCNGSLDQHLSQHSRIPLTWEERIKVAIGVSKGLQYLHENNIIHRDVRPNNILLTHDRQTLLGDFGLARNQHEDSIQSTEVIGTLGYLAPEYAEYGKVSAKIDVYSFGVVLLELITGMRTTDKRLKGKSLVGWARPLLKDRKYHDLIDERITNSHDFHQLFWMVRITEKCLTRDPQKRLNMVAVVNVLSRILEGYTCIIPRDHSPTRSESSYSSLDSDESEDDDEEAFESEXDSRTVSNCENSLKPDYLKTPTFISNCENLKPDYWKTPTITSNCENLMPDYWTTPALPPILRTF 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1098 657 SMART tyrkin_6 288 550 IPR020635 GO:0004713|GO:0006468
Lele32g1098 657 MobiDBLite consensus disorder prediction 577 592 - -
Lele32g1098 657 ProSitePatterns Tyrosine protein kinases specific active-site signature. 404 416 IPR008266 GO:0004672|GO:0006468
Lele32g1098 657 FunFam Proline-rich receptor-like protein kinase PERK8 250 362 - -
Lele32g1098 657 ProSiteProfiles Protein kinase domain profile. 288 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1098 657 MobiDBLite consensus disorder prediction 569 600 - -
Lele32g1098 657 PANTHER OS01G0253100 PROTEIN 176 553 IPR045271 -
Lele32g1098 657 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 363 565 - -
Lele32g1098 657 Coils Coil 208 231 - -
Lele32g1098 657 MobiDBLite consensus disorder prediction 194 221 - -
Lele32g1098 657 MobiDBLite consensus disorder prediction 157 231 - -
Lele32g1098 657 Gene3D Transferase(Phosphotransferase) domain 1 363 561 - -
Lele32g1098 657 Pfam Protein tyrosine and serine/threonine kinase 291 549 IPR001245 GO:0004672|GO:0006468
Lele32g1098 657 Gene3D Phosphorylase Kinase; domain 1 260 362 - -
Lele32g1098 657 SUPERFAMILY Protein kinase-like (PK-like) 272 572 IPR011009 -
Lele32g1098 657 MobiDBLite consensus disorder prediction 167 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1098 Lele-ChrLele32 10061988 10066961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1098 276 555 Trihelix Transcription Factor Family AT5G38560 47.099 4.89e-78 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele32g1098 PK_Tyr_Ser-Thr 5e-51 CL0016